KEGG   PATHWAY: mrb00010
Entry
mrb00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Meiothermus ruber DSM 1279
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mrb00010  Glycolysis / Gluconeogenesis
mrb00010

Module
mrb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mrb00010]
mrb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mrb00010]
mrb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mrb00010]
mrb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mrb00010]
Other DBs
GO: 0006096 0006094
Organism
Meiothermus ruber DSM 1279 [GN:mrb]
Gene
Mrub_0493  ROK family protein [KO:K25026] [EC:2.7.1.2]
Mrub_2801  phosphoglucose isomerase (PGI) [KO:K01810] [EC:5.3.1.9]
Mrub_0615  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Mrub_1275  phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Mrub_1639  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Mrub_1277  deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase [KO:K11645] [EC:4.1.2.13]
Mrub_2873  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Mrub_1276  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Mrub_1520  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Mrub_0945  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Mrub_0944  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Mrub_2906  Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Mrub_1107  metalloenzyme domain protein [KO:K15633] [EC:5.4.2.12]
Mrub_0466  phosphonopyruvate decarboxylase-related protein [KO:K15635] [EC:5.4.2.12]
Mrub_0003  enolase [KO:K01689] [EC:4.2.1.11]
Mrub_0004  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Mrub_2577  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Mrub_0476  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Mrub_1517  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
Mrub_1516  Transketolase central region [KO:K00162] [EC:1.2.4.1]
Mrub_0477  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Mrub_1532  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Mrub_2323  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Mrub_1129  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Mrub_1128  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Mrub_2233  Aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
Mrub_1300  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Mrub_1301  transcriptional regulator, IclR family [KO:K01895] [EC:6.2.1.1]
Mrub_1302  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Mrub_2222  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Mrub_1585  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Mrub_2052  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Mrub_2799  Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mrb00020  Citrate cycle (TCA cycle)
mrb00030  Pentose phosphate pathway
mrb00500  Starch and sucrose metabolism
mrb00620  Pyruvate metabolism
mrb00640  Propanoate metabolism
mrb00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
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