KEGG   PATHWAY: msyl00940
Entry
msyl00940                   Pathway                                
Name
Phenylpropanoid biosynthesis - Malus sylvestris (European crab apple)
Description
Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
Class
Metabolism; Biosynthesis of other secondary metabolites
Pathway map
msyl00940  Phenylpropanoid biosynthesis
msyl00940

Module
msyl_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:msyl00940]
msyl_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:msyl00940]
Other DBs
GO: 0009699
Organism
Malus sylvestris (European crab apple) [GN:msyl]
Gene
126628842  phenylalanine ammonia-lyase 1-like [KO:K10775] [EC:4.3.1.24]
126617791  phenylalanine ammonia-lyase 1-like [KO:K10775] [EC:4.3.1.24]
126619686  phenylalanine ammonia-lyase 1 [KO:K10775] [EC:4.3.1.24]
126593024  phenylalanine ammonia-lyase 1 [KO:K10775] [EC:4.3.1.24]
126614664  trans-cinnamate 4-monooxygenase-like [KO:K00487] [EC:1.14.14.91]
126614665  trans-cinnamate 4-monooxygenase-like [KO:K00487] [EC:1.14.14.91]
126614666  trans-cinnamate 4-monooxygenase-like [KO:K00487] [EC:1.14.14.91]
126614668  trans-cinnamate 4-monooxygenase-like [KO:K00487] [EC:1.14.14.91]
126589351  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
126599487  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
126599488  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
126625942  4-coumarate--CoA ligase 2-like [KO:K01904] [EC:6.2.1.12]
126600049  4-coumarate--CoA ligase-like 6 [KO:K01904] [EC:6.2.1.12]
126611212  4-coumarate--CoA ligase 1-like [KO:K01904] [EC:6.2.1.12]
126628593  4-coumarate--CoA ligase 2-like [KO:K01904] [EC:6.2.1.12]
126589549  probable CoA ligase CCL7 [KO:K01904] [EC:6.2.1.12]
126616581  probable CoA ligase CCL7 [KO:K01904] [EC:6.2.1.12]
126596367  4-coumarate--CoA ligase 2-like [KO:K01904] [EC:6.2.1.12]
126596716  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
126597086  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
126625355  LOW QUALITY PROTEIN: 4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
126583069  shikimate O-hydroxycinnamoyltransferase-like [KO:K13065] [EC:2.3.1.133]
126597764  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126609976  shikimate O-hydroxycinnamoyltransferase-like [KO:K13065] [EC:2.3.1.133]
126609977  shikimate O-hydroxycinnamoyltransferase-like [KO:K13065] [EC:2.3.1.133]
126585268  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126585269  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126587242  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126618503  shikimate O-hydroxycinnamoyltransferase-like [KO:K13065] [EC:2.3.1.133]
126619181  acyltransferase GLAUCE [KO:K13065] [EC:2.3.1.133]
126606568  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126606570  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126606571  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126595200  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126595499  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126596354  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126596718  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126596720  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
126608600  spermidine hydroxycinnamoyl transferase [KO:K13065] [EC:2.3.1.133]
126599158  cytochrome P450 98A2-like [KO:K09754] [EC:1.14.14.96]
126603427  cytochrome P450 98A2 [KO:K09754] [EC:1.14.14.96]
126631773  cytochrome P450 98A2-like [KO:K09754] [EC:1.14.14.96]
126631775  cytochrome P450 98A2-like [KO:K09754] [EC:1.14.14.96]
126605902  cytochrome P450 98A2-like [KO:K09754] [EC:1.14.14.96]
126612593  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
126612595  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
126612617  caffeoylshikimate esterase-like isoform X1 [KO:K18368] [EC:3.1.1.-]
126614857  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
126627997  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
126589273  caffeoylshikimate esterase-like isoform X1 [KO:K18368] [EC:3.1.1.-]
126622941  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
126607903  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
126582273  caffeoylshikimate esterase-like isoform X1 [KO:K18368] [EC:3.1.1.-]
126609005  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
126597263  probable caffeoyl-CoA O-methyltransferase At4g26220 isoform X1 [KO:K00588] [EC:2.1.1.104]
126597292  probable caffeoyl-CoA O-methyltransferase At4g26220 [KO:K00588] [EC:2.1.1.104]
126597306  probable caffeoyl-CoA O-methyltransferase At4g26220 [KO:K00588] [EC:2.1.1.104]
126585520  caffeoyl-CoA O-methyltransferase-like isoform X1 [KO:K00588] [EC:2.1.1.104]
126624175  caffeoyl-CoA O-methyltransferase [KO:K00588] [EC:2.1.1.104]
126583119  cinnamoyl-CoA reductase 1-like [KO:K09753] [EC:1.2.1.44]
126611213  cinnamoyl-CoA reductase 1-like [KO:K09753] [EC:1.2.1.44]
126601446  aldehyde dehydrogenase family 2 member C4 [KO:K12355] [EC:1.2.1.68]
126594665  aldehyde dehydrogenase family 2 member C4-like isoform X1 [KO:K12355] [EC:1.2.1.68]
126594702  aldehyde dehydrogenase family 2 member C4-like isoform X1 [KO:K12355] [EC:1.2.1.68]
126594728  aldehyde dehydrogenase family 2 member C4-like [KO:K12355] [EC:1.2.1.68]
126594743  aldehyde dehydrogenase family 2 member C4-like [KO:K12355] [EC:1.2.1.68]
126584967  cytochrome P450 84A1-like [KO:K09755] [EC:1.14.-.-]
126613915  cytochrome P450 84A1-like [KO:K09755] [EC:1.14.-.-]
126605883  cytochrome P450 84A1-like [KO:K09755] [EC:1.14.-.-]
126587406  anthranilate N-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126587408  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126629573  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126629826  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126630014  caffeic acid 3-O-methyltransferase [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126630015  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126630016  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126630017  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126630193  caffeic acid 3-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126602260  caffeic acid 3-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126602261  caffeic acid 3-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126617782  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126602960  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126633822  caffeic acid 3-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126633858  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126622479  anthranilate N-methyltransferase-like isoform X1 [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126622651  caffeic acid 3-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126624198  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126625233  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126625250  caffeic acid 3-O-methyltransferase-like isoform X1 [KO:K13066] [EC:2.1.1.68 2.1.1.4]
126610012  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
126584608  cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
126585680  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
126600595  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
126612471  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
126612472  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
126629303  probable cinnamyl alcohol dehydrogenase 9 [KO:K00083] [EC:1.1.1.195]
126601235  probable mannitol dehydrogenase isoform X1 [KO:K00083] [EC:1.1.1.195]
126602146  probable cinnamyl alcohol dehydrogenase 6 [KO:K00083] [EC:1.1.1.195]
126632221  probable cinnamyl alcohol dehydrogenase 6 isoform X1 [KO:K00083] [EC:1.1.1.195]
126605660  cinnamyl alcohol dehydrogenase 1-like [KO:K00083] [EC:1.1.1.195]
126623362  cinnamyl alcohol dehydrogenase 1-like [KO:K00083] [EC:1.1.1.195]
126585155  berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
126587640  berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
126620715  berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
126624268  berberine bridge enzyme-like 26 [KO:K22395] [EC:1.1.1.195]
126624292  berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
126595127  1-Cys peroxiredoxin-like [KO:K11188] [EC:1.11.1.7 1.11.1.27 3.1.1.-]
126582936  peroxidase 27-like [KO:K00430] [EC:1.11.1.7]
126597203  peroxidase 6-like [KO:K00430] [EC:1.11.1.7]
126597564  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
126597565  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
126609390  peroxidase 29-like [KO:K00430] [EC:1.11.1.7]
126610254  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126610292  peroxidase 3-like [KO:K00430] [EC:1.11.1.7]
126625879  peroxidase 20 [KO:K00430] [EC:1.11.1.7]
126583591  peroxidase 63-like [KO:K00430] [EC:1.11.1.7]
126583934  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126598733  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
126610630  peroxidase 63-like [KO:K00430] [EC:1.11.1.7]
126626242  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
126626243  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
126584455  peroxidase 64 [KO:K00430] [EC:1.11.1.7]
126585009  peroxidase 7-like [KO:K00430] [EC:1.11.1.7]
126600112  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
126600173  peroxidase 51-like [KO:K00430] [EC:1.11.1.7]
126611740  peroxidase 3-like [KO:K00430] [EC:1.11.1.7]
126611976  peroxidase 52-like [KO:K00430] [EC:1.11.1.7]
126600961  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
126601084  peroxidase 17-like [KO:K00430] [EC:1.11.1.7]
126586357  peroxidase 42-like [KO:K00430] [EC:1.11.1.7]
126614643  peroxidase 47-like [KO:K00430] [EC:1.11.1.7]
126627899  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126628249  peroxidase 17-like [KO:K00430] [EC:1.11.1.7]
126628256  peroxidase 17-like [KO:K00430] [EC:1.11.1.7]
126628291  peroxidase 17-like isoform X1 [KO:K00430] [EC:1.11.1.7]
126587018  peroxidase 7-like [KO:K00430] [EC:1.11.1.7]
126587118  putative Peroxidase 48 [KO:K00430] [EC:1.11.1.7]
126615449  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
126615609  peroxidase 3-like [KO:K00430] [EC:1.11.1.7]
126615610  peroxidase 3-like [KO:K00430] [EC:1.11.1.7]
126588455  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126588457  peroxidase N-like [KO:K00430] [EC:1.11.1.7]
126588575  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126616029  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126616030  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126616201  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126616202  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126616203  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126616204  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126616414  peroxidase 60 [KO:K00430] [EC:1.11.1.7]
126616425  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
126616438  peroxidase 59-like [KO:K00430] [EC:1.11.1.7]
126589505  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
126601658  peroxidase 72-like [KO:K00430] [EC:1.11.1.7]
126616805  peroxidase N1-like [KO:K00430] [EC:1.11.1.7]
126617355  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
126630373  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126630434  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
126590538  peroxidase 72-like isoform X1 [KO:K00430] [EC:1.11.1.7]
126590712  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
126590713  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126602541  peroxidase 9 [KO:K00430] [EC:1.11.1.7]
126617787  peroxidase 21 [KO:K00430] [EC:1.11.1.7]
126631635  peroxidase 9-like [KO:K00430] [EC:1.11.1.7]
126591493  peroxidase 47-like [KO:K00430] [EC:1.11.1.7]
126619351  probable peroxidase 26 [KO:K00430] [EC:1.11.1.7]
126632561  peroxidase 18 isoform X1 [KO:K00430] [EC:1.11.1.7]
126632831  peroxidase 43 [KO:K00430] [EC:1.11.1.7]
126592843  peroxidase A2-like [KO:K00430] [EC:1.11.1.7]
126604316  peroxidase 16-like [KO:K00430] [EC:1.11.1.7]
126604540  peroxidase 17-like [KO:K00430] [EC:1.11.1.7]
126604863  peroxidase 10-like [KO:K00430] [EC:1.11.1.7]
126604902  peroxidase 64-like [KO:K00430] [EC:1.11.1.7]
126619547  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
126619636  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
126619699  peroxidase 9-like [KO:K00430] [EC:1.11.1.7]
126620121  peroxidase P7-like isoform X1 [KO:K00430] [EC:1.11.1.7]
126632996  peroxidase N1-like [KO:K00430] [EC:1.11.1.7]
126632997  peroxidase N1-like isoform X1 [KO:K00430] [EC:1.11.1.7]
126632998  peroxidase N1-like [KO:K00430] [EC:1.11.1.7]
126632999  peroxidase N1-like isoform X1 [KO:K00430] [EC:1.11.1.7]
126633287  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
126605626  peroxidase 25-like [KO:K00430] [EC:1.11.1.7]
126621733  peroxidase 7-like [KO:K00430] [EC:1.11.1.7]
126634233  peroxidase 55-like [KO:K00430] [EC:1.11.1.7]
126634279  peroxidase 3 [KO:K00430] [EC:1.11.1.7]
126594097  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
126594403  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
126622258  peroxidase 19 [KO:K00430] [EC:1.11.1.7]
126594918  peroxidase 11-like [KO:K00430] [EC:1.11.1.7]
126595565  peroxidase 16-like [KO:K00430] [EC:1.11.1.7]
126607498  peroxidase 11 [KO:K00430] [EC:1.11.1.7]
126595854  peroxidase 29-like [KO:K00430] [EC:1.11.1.7]
126607978  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
126607979  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
126608161  peroxidase 24-like [KO:K00430] [EC:1.11.1.7]
126623881  peroxidase 42-like [KO:K00430] [EC:1.11.1.7]
126596607  peroxidase 40-like [KO:K00430] [EC:1.11.1.7]
126597098  lignin-forming anionic peroxidase-like [KO:K00430] [EC:1.11.1.7]
126608540  peroxidase 6-like [KO:K00430] [EC:1.11.1.7]
126624518  putative Peroxidase 48 [KO:K00430] [EC:1.11.1.7]
126624630  peroxidase 10 [KO:K00430] [EC:1.11.1.7]
126624981  peroxidase 66 [KO:K00430] [EC:1.11.1.7]
126613900  anthocyanidin 3-O-glucosyltransferase 5-like [KO:K12356] [EC:2.4.1.111]
126603914  anthocyanidin 3-O-glucosyltransferase 5-like isoform X1 [KO:K12356] [EC:2.4.1.111]
126604959  anthocyanidin 3-O-glucosyltransferase 5-like isoform X1 [KO:K12356] [EC:2.4.1.111]
126582059  anthocyanidin 3-O-glucosyltransferase 5-like [KO:K12356] [EC:2.4.1.111]
Compound
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00223  p-Coumaroyl-CoA
C00315  Spermidine
C00323  Caffeoyl-CoA
C00406  Feruloyl-CoA
C00411  Sinapoyl-CoA
C00423  trans-Cinnamate
C00482  Sinapate
C00540  Cinnamoyl-CoA
C00590  Coniferyl alcohol
C00761  Coniferin
C00811  4-Coumarate
C00852  Chlorogenate
C00903  Cinnamaldehyde
C00933  Sinapine
C01175  1-O-Sinapoyl-beta-D-glucose
C01197  Caffeate
C01494  Ferulate
C01533  Syringin
C02325  Sinapyl alcohol
C02646  4-Coumaryl alcohol
C02666  Coniferyl aldehyde
C02887  Sinapoyl malate
C02947  4-Coumaroylshikimate
C04366  3-(2-Carboxyethenyl)-cis,cis-muconate
C05608  4-Hydroxycinnamyl aldehyde
C05610  Sinapoyl aldehyde
C05619  5-Hydroxyferulic acid
C05627  4-Hydroxystyrene
C05855  4-Hydroxycinnamyl alcohol 4-D-glucoside
C06224  3,4-Dihydroxystyrene
C10428  Anethole
C10434  5-O-Caffeoylshikimic acid
C10452  Estragole
C10453  Eugenol
C10454  Methyleugenol
C10469  Isoeugenol
C10478  Methylisoeugenol
C10945  Caffeic aldehyde
C12203  5-Hydroxyferuloyl-CoA
C12204  5-Hydroxyconiferaldehyde
C12205  5-Hydroxyconiferyl alcohol
C12206  Caffeyl alcohol
C12208  p-Coumaroyl quinic acid
C15804  p-Hydroxyphenyl lignin
C15805  Guaiacyl lignin
C15806  Syringyl lignin
C15807  5-Hydroxy-guaiacyl lignin
C16930  Chavicol
C18069  N1,N5,N10-Tricoumaroyl spermidine
C18070  N1,N5,N10-Tricaffeoyl spermidine
C18071  N1,N5,N10-Triferuloyl spermidine
C18072  N1,N5,N10-Tri(hydroxyferuloyl) spermidine
C18073  N1,N5-Di(hydroxyferuloyl)-N10-sinapoyl spermidine
C20225  Coniferyl acetate
C20464  Isochavicol
C20465  Coumaryl acetate
Reference
  Authors
Nair RB, Bastress KL, Ruegger MO, Denault JW, Chapple C.
  Title
The Arabidopsis thaliana REDUCED EPIDERMAL FLUORESCENCE1 gene encodes an aldehyde dehydrogenase involved in ferulic acid and sinapic acid biosynthesis.
  Journal
Plant Cell 16:544-54 (2004)
DOI:10.1105/tpc.017509
Reference
  Authors
Baucher M, Halpin C, Petit-Conil M, Boerjan W.
  Title
Lignin: genetic engineering and impact on pulping.
  Journal
Crit Rev Biochem Mol Biol 38:305-50 (2003)
DOI:10.1080/10409230391036757
Reference
  Authors
Rogers LA, Dubos C, Cullis IF, Surman C, Poole M, Willment J, Mansfield SD, Campbell MM.
  Title
Light, the circadian clock, and sugar perception in the control of lignin biosynthesis.
  Journal
J Exp Bot 56:1651-63 (2005)
DOI:10.1093/jxb/eri162
Reference
  Authors
Whetten R, Sederoff R.
  Title
Lignin Biosynthesis.
  Journal
Plant Cell 7:1001-1013 (1995)
DOI:10.1105/tpc.7.7.1001
Reference
PMID:8972602
  Authors
Lorenzen M, Racicot V, Strack D, Chapple C.
  Title
Sinapic acid ester metabolism in wild type and a sinapoylglucose-accumulating mutant of arabidopsis.
  Journal
Plant Physiol 112:1625-30 (1996)
DOI:10.1104/pp.112.4.1625
Reference
PMID:1477555
  Authors
Chapple CC, Vogt T, Ellis BE, Somerville CR.
  Title
An Arabidopsis mutant defective in the general phenylpropanoid pathway.
  Journal
Plant Cell 4:1413-24 (1992)
DOI:10.1105/tpc.4.11.1413
Reference
  Authors
Raes J, Rohde A, Christensen JH, Van de Peer Y, Boerjan W.
  Title
Genome-wide characterization of the lignification toolbox in Arabidopsis.
  Journal
Plant Physiol 133:1051-71 (2003)
DOI:10.1104/pp.103.026484
Reference
  Authors
Costa MA, Collins RE, Anterola AM, Cochrane FC, Davin LB, Lewis NG.
  Title
An in silico assessment of gene function and organization of the phenylpropanoid pathway metabolic networks in Arabidopsis thaliana and limitations thereof.
  Journal
Phytochemistry 64:1097-112 (2003)
DOI:10.1016/S0031-9422(03)00517-X
Reference
  Authors
Meyermans H, Morreel K, Lapierre C, Pollet B, De Bruyn A, Busson R, Herdewijn P, Devreese B, Van Beeumen J, Marita JM, Ralph J, Chen C, Burggraeve B, Van Montagu M, Messens E, Boerjan W.
  Title
Modifications in lignin and accumulation of phenolic glucosides in poplar xylem upon down-regulation of caffeoyl-coenzyme A O-methyltransferase, an enzyme involved in lignin biosynthesis.
  Journal
J Biol Chem 275:36899-909 (2000)
DOI:10.1074/jbc.M006915200
Reference
  Authors
Gachon CM, Langlois-Meurinne M, Henry Y, Saindrenan P.
  Title
Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications.
  Journal
Plant Mol Biol 58:229-45 (2005)
DOI:10.1007/s11103-005-5346-5
Reference
  Authors
Li L, Popko JL, Umezawa T, Chiang VL.
  Title
5-hydroxyconiferyl aldehyde modulates enzymatic methylation for syringyl monolignol formation, a new view of monolignol biosynthesis in angiosperms.
  Journal
J Biol Chem 275:6537-45 (2000)
DOI:10.1074/jbc.275.9.6537
Reference
  Authors
Yamauchi K, Yasuda S, Fukushima K.
  Title
Evidence for the biosynthetic pathway from sinapic acid to syringyl lignin using labeled sinapic acid with stable isotope at both methoxy groups in Robinia pseudoacacia and Nerium indicum.
  Journal
J Agric Food Chem 50:3222-7 (2002)
DOI:10.1021/jf011565x
Reference
  Authors
Eckardt NA.
  Title
Probing the mysteries of lignin biosynthesis: the crystal structure of caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase provides new insights.
  Journal
Plant Cell 14:1185-9 (2002)
DOI:10.1105/tpc.140610
Related
pathway
msyl00130  Ubiquinone and other terpenoid-quinone biosynthesis
msyl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
msyl00941  Flavonoid biosynthesis
msyl00945  Stilbenoid, diarylheptanoid and gingerol biosynthesis
KO pathway
ko00940   
LinkDB

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