KEGG   PATHWAY: nake00240
Entry
nake00240                   Pathway                                
Name
Pyrimidine metabolism - Nocardiopsis akebiae
Class
Metabolism; Nucleotide metabolism
Pathway map
nake00240  Pyrimidine metabolism
nake00240

Module
nake_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nake00240]
nake_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nake00240]
nake_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nake00240]
Other DBs
GO: 0006220 0006213
Organism
Nocardiopsis akebiae [GN:nake]
Gene
KGD83_08655  ATP-grasp domain-containing protein [KO:K01955] [EC:6.3.5.5]
KGD83_10105  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
KGD83_10100  carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
KGD83_10090  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
KGD83_10095  dihydroorotase [KO:K01465] [EC:3.5.2.3]
KGD83_10115  dihydroorotate dehydrogenase [KO:K17828] [EC:1.3.1.14]
KGD83_10110  dihydroorotate dehydrogenase electron transfer subunit [KO:K02823]
KGD83_21610  quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
KGD83_02000  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
KGD83_10120  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
KGD83_24630  UMP kinase [KO:K09903] [EC:2.7.4.22]
KGD83_08135  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
KGD83_20755  CTP synthase [KO:K01937] [EC:6.3.4.2]
KGD83_20705  (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
KGD83_05985  5'-nucleotidase C-terminal domain-containing protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
KGD83_11775  HAD family hydrolase [KO:K02566] [EC:3.1.3.5]
KGD83_00975  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
KGD83_10085  pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [KO:K02825] [EC:2.4.2.9]
KGD83_09440  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
KGD83_02415  dCTP deaminase [KO:K01494] [EC:3.5.4.13]
KGD83_02090  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
KGD83_02095  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
KGD83_04300  R2-like ligand-binding oxidase [KO:K00526] [EC:1.17.4.1]
KGD83_27025  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
KGD83_11200  dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
KGD83_09445  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
KGD83_25095  thymidine kinase [KO:K00857] [EC:2.7.1.21]
KGD83_08985  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
KGD83_18630  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
KGD83_25885  hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
KGD83_25880  acyltransferase [KO:K01431] [EC:3.5.1.6]
KGD83_20485  M20 family metallo-hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
KGD83_10600  allantoate amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
KGD83_02600  LLM class flavin-dependent oxidoreductase [KO:K09018] [EC:1.14.99.46]
KGD83_05935  malonic semialdehyde reductase [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
nake00030  Pentose phosphate pathway
nake00220  Arginine biosynthesis
nake00250  Alanine, aspartate and glutamate metabolism
nake00280  Valine, leucine and isoleucine degradation
nake00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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