KEGG   PATHWAY: nkf00010
Entry
nkf00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Candidatus Nitrospira kreftii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nkf00010  Glycolysis / Gluconeogenesis
nkf00010

Module
nkf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nkf00010]
nkf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nkf00010]
nkf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nkf00010]
Other DBs
GO: 0006096 0006094
Organism
Candidatus Nitrospira kreftii [GN:nkf]
Gene
Nkreftii_004006  Glucokinase [KO:K00845] [EC:2.7.1.2]
Nkreftii_004008  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Nkreftii_000342  Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Nkreftii_001255  Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
Nkreftii_001256  Fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
Nkreftii_000277  Fructose-1,6-bisphosphate aldolase/phosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Nkreftii_001516  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Nkreftii_001518  glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
Nkreftii_002232  Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Nkreftii_001517  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Nkreftii_003712  phosphoglyceromutase 1 [KO:K01834] [EC:5.4.2.11]
Nkreftii_003878  putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
Nkreftii_001356  enolase [KO:K01689] [EC:4.2.1.11]
Nkreftii_001935  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Nkreftii_001554  Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Nkreftii_003129  pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
Nkreftii_000202  Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
Nkreftii_000201  Alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
Nkreftii_000200  Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
Nkreftii_003130  Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase [KO:K00627] [EC:2.3.1.12]
Nkreftii_002323  hypothetical protein [KO:K00382] [EC:1.8.1.4]
Nkreftii_003131  lipoamide dehydrogenase, E3 component [KO:K00382] [EC:1.8.1.4]
Nkreftii_000163  Pyruvate synthase subunit PorA [KO:K00169] [EC:1.2.7.1]
Nkreftii_000974  2-oxoglutarate:ferredoxin oxidoreductase alpha subunit [KO:K00169] [EC:1.2.7.1]
Nkreftii_001077  Pyruvate:ferredoxin oxidoreductase alpha subunit [KO:K00169] [EC:1.2.7.1]
Nkreftii_003687  Pyruvate:ferredoxin oxidoreductase alpha subunit [KO:K00169] [EC:1.2.7.1]
Nkreftii_000164  Pyruvate synthase subunit PorB [KO:K00170] [EC:1.2.7.1]
Nkreftii_000970  2-oxoglutarate:ferredoxin oxidoreductase beta subunit [KO:K00170] [EC:1.2.7.1]
Nkreftii_001076  2-oxoglutarate:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
Nkreftii_003688  Pyruvate:ferredoxin oxidoreductase beta subunit [KO:K00170] [EC:1.2.7.1]
Nkreftii_000162  hypothetical protein [KO:K00172] [EC:1.2.7.1]
Nkreftii_000971  2-oxoglutarate:ferredoxin oxidoreductase gamma subunit [KO:K00172] [EC:1.2.7.1]
Nkreftii_003689  Pyruvate:ferredoxin oxidoreductase gamma subunit [KO:K00172] [EC:1.2.7.1]
Nkreftii_003690  Pyruvate:ferredoxin oxidoreductase epsilon subunit [KO:K00171] [EC:1.2.7.1]
Nkreftii_000174  hypothetical protein [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Nkreftii_000140  hypothetical protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Nkreftii_000824  putative alcohol dehydrogenase AdhA [KO:K13953] [EC:1.1.1.1]
Nkreftii_000374  putative oxidoreductase, Zn-dependent and NAD(P)-binding [KO:K13979] [EC:1.1.1.2]
Nkreftii_000203  Acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Nkreftii_001567  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Nkreftii_001787  hypothetical protein [KO:K01785] [EC:5.1.3.3]
Nkreftii_001538  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Nkreftii_001253  Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
nkf00020  Citrate cycle (TCA cycle)
nkf00030  Pentose phosphate pathway
nkf00500  Starch and sucrose metabolism
nkf00620  Pyruvate metabolism
nkf00640  Propanoate metabolism
nkf00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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