KEGG   PATHWAY: ocd00010
Entry
ocd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Oceanicola sp. D3
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ocd00010  Glycolysis / Gluconeogenesis
ocd00010

Module
ocd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ocd00010]
ocd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ocd00010]
ocd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ocd00010]
ocd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ocd00010]
Other DBs
GO: 0006096 0006094
Organism
Oceanicola sp. D3 [GN:ocd]
Gene
FHY55_11370  glucokinase [KO:K00845] [EC:2.7.1.2]
FHY55_09615  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FHY55_18485  hexose kinase [KO:K16370] [EC:2.7.1.11]
FHY55_13655  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
FHY55_11275  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
FHY55_10955  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FHY55_08885  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FHY55_08590  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FHY55_08620  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FHY55_06280  aldehyde dehydrogenase [KO:K00134] [EC:1.2.1.12]
FHY55_11285  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FHY55_16810  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
FHY55_03340  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
FHY55_12205  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
FHY55_17945  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FHY55_14710  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
FHY55_11265  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
FHY55_11260  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
FHY55_11250  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
FHY55_08235  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FHY55_05780  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FHY55_20315  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
FHY55_11665  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FHY55_03640  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FHY55_04290  zinc-binding dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FHY55_16375  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FHY55_06050  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FHY55_07765  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FHY55_19125  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
FHY55_13990  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
FHY55_18270  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ocd00020  Citrate cycle (TCA cycle)
ocd00030  Pentose phosphate pathway
ocd00500  Starch and sucrose metabolism
ocd00620  Pyruvate metabolism
ocd00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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