KEGG   PATHWAY: ock00240
Entry
ock00240                    Pathway                                
Name
Pyrimidine metabolism - Oceanispirochaeta crateris
Class
Metabolism; Nucleotide metabolism
Pathway map
ock00240  Pyrimidine metabolism
ock00240

Module
ock_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ock00240]
ock_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ock00240]
Other DBs
GO: 0006220 0006213
Organism
Oceanispirochaeta crateris [GN:ock]
Gene
EXM22_07130  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
EXM22_07135  carA; carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
EXM22_04580  pyrB; aspartate carbamoyltransferase [KO:K00608] [EC:2.1.3.2]
EXM22_14370  dihydroorotase [KO:K01465] [EC:3.5.2.3]
EXM22_11645  dihydroorotate dehydrogenase [KO:K17828] [EC:1.3.1.14]
EXM22_11640  dihydroorotate dehydrogenase electron transfer subunit [KO:K02823]
EXM22_04520  dihydroorotate dehydrogenase-like protein [KO:K00226] [EC:1.3.98.1]
EXM22_03680  pyrF; orotidine-5'-phosphate decarboxylase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
EXM22_10855  UMP kinase [KO:K09903] [EC:2.7.4.22]
EXM22_13010  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
EXM22_06320  maf; septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
EXM22_11150  CTP synthase [KO:K01937] [EC:6.3.4.2]
EXM22_06060  cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
EXM22_09480  cytidylate kinase [KO:K00945] [EC:2.7.4.25]
EXM22_06190  uridine kinase [KO:K00876] [EC:2.7.1.48]
EXM22_05465  nucleoside kinase [KO:K00876] [EC:2.7.1.48]
EXM22_13355  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
EXM22_01195  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
EXM22_09585  HAD family hydrolase [KO:K02566] [EC:3.1.3.5]
EXM22_15655  uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
EXM22_07995  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
EXM22_11270  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
EXM22_04995  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
EXM22_18010  thymidine phosphorylase [KO:K00756] [EC:2.4.2.2]
EXM22_07910  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
EXM22_04230  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
EXM22_04895  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
EXM22_05525  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
EXM22_06645  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
EXM22_07550  cell division protein DedD [KO:K01493] [EC:3.5.4.12]
EXM22_06535  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
EXM22_06460  dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
EXM22_06180  thymidine kinase [KO:K00857] [EC:2.7.1.21]
EXM22_14100  FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
EXM22_16530  hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
ock00030  Pentose phosphate pathway
ock00220  Arginine biosynthesis
ock00250  Alanine, aspartate and glutamate metabolism
ock00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   
LinkDB

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