KEGG   PATHWAY: oek00630
Entry
oek00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Oerskovia sp. KBS0722
Class
Metabolism; Carbohydrate metabolism
Pathway map
oek00630  Glyoxylate and dicarboxylate metabolism
oek00630

Module
oek_M00012  Glyoxylate cycle [PATH:oek00630]
oek_M00621  Glycine cleavage system [PATH:oek00630]
Other DBs
GO: 0046487 0043648
Organism
Oerskovia sp. KBS0722 [GN:oek]
Gene
FFI11_016955  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
FFI11_006650  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FFI11_016960  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
FFI11_003980  lactate dehydrogenase [KO:K00024] [EC:1.1.1.37]
FFI11_009185  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
FFI11_016710  citrate synthase [KO:K01647] [EC:2.3.3.1]
FFI11_014445  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
FFI11_005995  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FFI11_010460  thiolase family protein [KO:K00626] [EC:2.3.1.9]
FFI11_002330  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FFI11_001200  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FFI11_016440  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
FFI11_016415  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
FFI11_011850  catalase [KO:K03781] [EC:1.11.1.6]
FFI11_001800  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
FFI11_014965  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
FFI11_015235  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FFI11_009280  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FFI11_003985  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
FFI11_003990  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FFI11_010025  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FFI11_014895  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FFI11_003995  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FFI11_014780  hypothetical protein [KO:K00865] [EC:2.7.1.165]
FFI11_018400  glycerate kinase [KO:K00865] [EC:2.7.1.165]
FFI11_009740  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FFI11_017780  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
FFI11_009210  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
oek00010  Glycolysis / Gluconeogenesis
oek00020  Citrate cycle (TCA cycle)
oek00030  Pentose phosphate pathway
oek00071  Fatty acid degradation
oek00230  Purine metabolism
oek00250  Alanine, aspartate and glutamate metabolism
oek00260  Glycine, serine and threonine metabolism
oek00620  Pyruvate metabolism
oek00710  Carbon fixation by Calvin cycle
oek00750  Vitamin B6 metabolism
oek00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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