KEGG   PATHWAY: pacb00010
Entry
pacb00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pectobacterium actinidiae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pacb00010  Glycolysis / Gluconeogenesis
pacb00010

Module
pacb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pacb00010]
pacb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pacb00010]
pacb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pacb00010]
pacb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pacb00010]
Other DBs
GO: 0006096 0006094
Organism
Pectobacterium actinidiae [GN:pacb]
Gene
M9782_08985  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
M9782_21165  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
M9782_01145  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
M9782_12335  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
M9782_20865  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
M9782_01060  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
M9782_03985  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
M9782_03990  class II fructose-bisphosphate aldolase family protein [KO:K01624] [EC:4.1.2.13]
M9782_20790  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
M9782_01080  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
M9782_06385  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
M9782_12375  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
M9782_20795  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
M9782_08890  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
M9782_20720  gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB [KO:K15634] [EC:5.4.2.11]
M9782_19320  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
M9782_11700  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
M9782_14775  pykF; pyruvate kinase PykF [KO:K00873] [EC:2.7.1.40]
M9782_14850  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
M9782_20195  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
M9782_20190  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
M9782_20185  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
M9782_06140  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
M9782_10810  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
M9782_12475  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
M9782_17545  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
M9782_19225  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
M9782_17535  NAD(P)-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
M9782_19940  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
M9782_21010  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
M9782_02735  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
M9782_06075  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
M9782_08920  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
M9782_02425  yihX; glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
M9782_08655  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
M9782_12370  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
M9782_00035  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
M9782_01850  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M9782_01975  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M9782_05275  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M9782_06350  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M9782_09210  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M9782_09320  family 1 glycosylhydrolase [KO:K01223] [EC:3.2.1.86]
M9782_09850  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M9782_13145  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M9782_14520  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M9782_14760  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
M9782_19705  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
M9782_06500  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
M9782_15060  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
M9782_17640  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
M9782_13150  ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pacb00020  Citrate cycle (TCA cycle)
pacb00030  Pentose phosphate pathway
pacb00500  Starch and sucrose metabolism
pacb00620  Pyruvate metabolism
pacb00640  Propanoate metabolism
pacb00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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