KEGG   PATHWAY: pamg00010
Entry
pamg00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas amygdali
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pamg00010  Glycolysis / Gluconeogenesis
pamg00010

Module
pamg_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pamg00010]
pamg_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pamg00010]
pamg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pamg00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas amygdali [GN:pamg]
Gene
BKM19_008405  glucokinase [KO:K00845] [EC:2.7.1.2]
BKM19_006650  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BKM19_003375  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
BKM19_027735  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
BKM19_024645  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
BKM19_011860  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
BKM19_008395  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
BKM19_027755  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
BKM19_030515  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
BKM19_028390  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
BKM19_009780  enolase [KO:K01689] [EC:4.2.1.11]
BKM19_030625  enolase [KO:K01689] [EC:4.2.1.11]
BKM19_023845  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BKM19_013100  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
BKM19_004205  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
BKM19_010605  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
BKM19_004200  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
BKM19_012670  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BKM19_009800  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BKM19_015150  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
BKM19_012575  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
BKM19_020665  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BKM19_019925  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BKM19_004810  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
BKM19_021110  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BKM19_007060  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
BKM19_014745  galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
BKM19_017355  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BKM19_002585  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
BKM19_029185  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
BKM19_002250  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pamg00020  Citrate cycle (TCA cycle)
pamg00030  Pentose phosphate pathway
pamg00500  Starch and sucrose metabolism
pamg00620  Pyruvate metabolism
pamg00640  Propanoate metabolism
pamg00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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