KEGG   PATHWAY: paqu00010
Entry
paqu00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pectobacterium aquaticum
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
paqu00010  Glycolysis / Gluconeogenesis
paqu00010

Module
paqu_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:paqu00010]
paqu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:paqu00010]
paqu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:paqu00010]
paqu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:paqu00010]
Other DBs
GO: 0006096 0006094
Organism
Pectobacterium aquaticum [GN:paqu]
Gene
DMB82_0014035  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
DMB82_0018035  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DMB82_0000640  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DMB82_0011225  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DMB82_0017750  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
DMB82_0000725  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
DMB82_0017675  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DMB82_0016435  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DMB82_0000680  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DMB82_0011185  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DMB82_0017680  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DMB82_0014125  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
DMB82_0017550  gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB [KO:K15634] [EC:5.4.2.11]
DMB82_0004505  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DMB82_0009380  pykF; pyruvate kinase PykF [KO:K00873] [EC:2.7.1.40]
DMB82_0011790  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DMB82_0009305  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DMB82_0017045  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DMB82_0017040  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
DMB82_0017035  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DMB82_0008625  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DMB82_0011080  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
DMB82_0006340  NAD(P)-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
DMB82_0017905  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
DMB82_0019930  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DMB82_0004130  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DMB82_0014095  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
DMB82_0020310  yihX; glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
DMB82_0014365  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
DMB82_0011190  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
DMB82_0018730  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
DMB82_0016470  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
DMB82_0000070  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DMB82_0003115  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DMB82_0009395  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DMB82_0010390  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DMB82_0013235  family 1 glycosylhydrolase [KO:K01223] [EC:3.2.1.86]
DMB82_0013610  family 1 glycosylhydrolase [KO:K01223] [EC:3.2.1.86]
DMB82_0016665  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
DMB82_0016335  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
DMB82_0012050  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
DMB82_0006185  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
DMB82_0007585  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
DMB82_0010385  ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
paqu00020  Citrate cycle (TCA cycle)
paqu00030  Pentose phosphate pathway
paqu00500  Starch and sucrose metabolism
paqu00620  Pyruvate metabolism
paqu00640  Propanoate metabolism
paqu00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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