KEGG   PATHWAY: parb02024
Entry
parb02024                   Pathway                                
Name
Quorum sensing - Paraburkholderia aromaticivorans
Description
Quorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal molecules called autoinducers (AIs) that increase in concentration as a function of cell density. The most commonly studied AIs belong to one of the following three categories: acylated homoserine lactones, also referred to as AI-1, used by Gram-negative bacteria; peptide signals, used by Gram-positive bacteria; and AI-2, used by both Gram-negative and Gram-positive bacteria. QS can be divided into at least 4 steps: production of AIs by the bacterial cell; release of AIs, either actively or passively, into the surrounding environment; recognition of AIs by specific receptors; and leading to changes in gene regulation once they exceed a threshold concentration. The processes controlled by QS include virulence, competence, conjugation, antibiotic production, motility, sporulation, and biofilm formation.
Class
Cellular Processes; Cellular community - prokaryotes
Pathway map
parb02024  Quorum sensing
parb02024

Other DBs
GO: 0009372
Organism
Paraburkholderia aromaticivorans [GN:parb]
Gene
CJU94_12440  RNA-binding protein Hfq [KO:K03666]
CJU94_16795  hfq; RNA chaperone Hfq [KO:K03666]
CJU94_26410  acyl-homoserine-lactone synthase [KO:K13060] [EC:2.3.1.184]
CJU94_26400  LuxR family transcriptional regulator [KO:K18304]
CJU94_07460  anthranilate synthase component I [KO:K01657] [EC:4.1.3.27]
CJU94_07455  aminodeoxychorismate/anthranilate synthase component II [KO:K01658] [EC:4.1.3.27]
CJU94_11750  alpha/beta hydrolase [KO:K18100] [EC:2.4.1.-]
CJU94_11760  glycosyl transferase family 1 [KO:K18101] [EC:2.4.1.-]
CJU94_11770  rhamnosyltransferase [KO:K12990] [EC:2.4.1.-]
CJU94_02615  3-deoxy-7-phosphoheptulonate synthase [KO:K01626] [EC:2.5.1.54]
CJU94_24110  3-deoxy-7-phosphoheptulonate synthase [KO:K01626] [EC:2.5.1.54]
CJU94_14345  two-component sensor histidine kinase [KO:K07645] [EC:2.7.13.3]
CJU94_14350  DNA-binding response regulator [KO:K07666]
CJU94_25040  flagellar transcriptional regulator FlhD [KO:K02403]
CJU94_05955  flagellar transcriptional regulator FlhD [KO:K02403]
CJU94_24800  flagellar transcriptional regulator FlhD [KO:K02403]
CJU94_05960  transcriptional regulator FlhC [KO:K02402]
CJU94_37440  transcriptional regulator FlhC [KO:K02402]
CJU94_37100  hypothetical protein [KO:K02402]
CJU94_24805  flagellar transcriptional regulator FlhC [KO:K02402]
CJU94_18705  two-component system response regulator KdpE [KO:K07667]
CJU94_03625  trbB; P-type conjugative transfer ATPase TrbB [KO:K20527] [EC:7.4.2.8]
CJU94_03630  conjugal transfer protein TrbC [KO:K20528]
CJU94_37130  hypothetical protein [KO:K20528]
CJU94_03635  conjugal transfer protein TrbD [KO:K20529]
CJU94_37135  conjugal transfer protein TrbD [KO:K20529]
CJU94_03640  conjugal transfer protein TrbE [KO:K20530] [EC:7.4.2.8]
CJU94_37140  type IV secretion system protein VirB4 [KO:K20530] [EC:7.4.2.8]
CJU94_03645  trbJ; P-type conjugative transfer protein TrbJ [KO:K20266]
CJU94_37145  conjugal transfer protein [KO:K20266]
CJU94_37150  conjugal transfer protein [KO:K20266]
CJU94_03655  trbL; P-type conjugative transfer protein TrbL [KO:K07344]
CJU94_37155  hypothetical protein [KO:K07344]
CJU94_03660  conjugal transfer protein TrbF [KO:K20531]
CJU94_37170  conjugal transfer protein TrbF [KO:K20531]
CJU94_39380  type VI secretion protein [KO:K20531]
CJU94_03665  trbG; P-type conjugative transfer protein TrbG [KO:K20532]
CJU94_37175  type IV secretion system protein VirB9 [KO:K20532]
CJU94_39385  conjugal transfer protein TrbG [KO:K20532]
CJU94_03670  conjugal transfer protein TrbI [KO:K20533]
CJU94_37180  hypothetical protein [KO:K20533]
CJU94_39390  conjugal transfer protein TraI [KO:K20533]
CJU94_31760  ABC transporter substrate-binding protein [KO:K02055]
CJU94_03995  iron ABC transporter substrate-binding protein [KO:K02055]
CJU94_33855  iron ABC transporter substrate-binding protein [KO:K02055]
CJU94_21135  spermidine/putrescine ABC transporter substrate-binding protein [KO:K02055]
CJU94_25555  spermidine/putrescine ABC transporter substrate-binding protein [KO:K02055]
CJU94_29965  branched-chain amino acid ABC transporter substrate-binding protein [KO:K02055]
CJU94_39945  signal peptide prediction [KO:K02055]
CJU94_22390  ABC transporter substrate-binding protein [KO:K02055]
CJU94_32650  spermidine/putrescine ABC transporter substrate-binding protein [KO:K02055]
CJU94_26385  ABC transporter substrate-binding protein [KO:K02055]
CJU94_11610  ABC transporter substrate-binding protein [KO:K02055]
CJU94_11710  spermidine/putrescine ABC transporter substrate-binding protein [KO:K02055]
CJU94_29110  spermidine/putrescine ABC transporter substrate-binding protein [KO:K02055]
CJU94_31775  ABC transporter permease [KO:K02053]
CJU94_03985  spermidine/putrescine ABC transporter permease [KO:K02053]
CJU94_33845  ABC transporter permease [KO:K02053]
CJU94_33860  ABC transporter permease [KO:K02053]
CJU94_21125  ABC transporter permease [KO:K02053]
CJU94_25535  ABC transporter permease [KO:K02053]
CJU94_29950  ABC transporter permease [KO:K02053]
CJU94_22400  ABC transporter permease [KO:K02053]
CJU94_26370  ABC transporter permease [KO:K02053]
CJU94_11600  ABC transporter permease [KO:K02053]
CJU94_11605  ABC transporter permease [KO:K02053]
CJU94_11700  polyamine ABC transporter permease [KO:K02053]
CJU94_29120  polyamine ABC transporter permease [KO:K02053]
CJU94_31780  ABC transporter permease [KO:K02054]
CJU94_03990  acriflavin resistance protein [KO:K02054]
CJU94_21130  ABC transporter permease [KO:K02054]
CJU94_25530  ABC transporter permease [KO:K02054]
CJU94_29955  ABC transporter permease [KO:K02054]
CJU94_22395  ABC transporter permease [KO:K02054]
CJU94_26375  ABC transporter permease [KO:K02054]
CJU94_11705  ABC transporter permease [KO:K02054]
CJU94_29115  polyamine ABC transporter substrate-binding protein [KO:K02054]
CJU94_31795  polyamine ABC transporter ATP-binding protein [KO:K02052]
CJU94_03980  Fe3+/spermidine/putrescine ABC transporter ATP-binding protein [KO:K02052]
CJU94_11715  Fe3+/spermidine/putrescine ABC transporter ATP-binding protein [KO:K02052]
CJU94_33850  ABC transporter ATP-binding protein [KO:K02052]
CJU94_21120  polyamine ABC transporter ATP-binding protein [KO:K02052]
CJU94_25525  Fe3+/spermidine/putrescine ABC transporter ATP-binding protein [KO:K02052]
CJU94_29960  Fe3+/spermidine/putrescine ABC transporter ATP-binding protein [KO:K02052]
CJU94_22385  ABC transporter ATP-binding protein [KO:K02052]
CJU94_26380  spermidine/putrescine ABC transporter ATP-binding protein [KO:K02052]
CJU94_11595  ABC transporter ATP-binding protein [KO:K02052]
CJU94_29105  Fe3+/spermidine/putrescine ABC transporter ATP-binding protein [KO:K02052]
CJU94_18575  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_34630  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_09245  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_01425  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_01605  amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_05770  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_38955  hypothetical protein [KO:K01999]
CJU94_35595  amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_35755  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_04570  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_21925  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_30825  ABC transporter permease [KO:K01999]
CJU94_39830  amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_05625  ABC transporter permease [KO:K01999]
CJU94_05640  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_05645  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_04145  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_17365  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_21790  ABC transporter substrate-binding protein [KO:K01999]
CJU94_26110  ABC transporter substrate-binding protein [KO:K01999]
CJU94_30390  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_23890  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_13135  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CJU94_01610  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_09250  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_10870  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_24715  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_05630  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_05650  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_21795  ABC transporter permease [KO:K01997 K01998]
CJU94_26140  ABC transporter permease [KO:K01997 K01998]
CJU94_30395  branched-chain amino acid ABC transporter permease [KO:K01997]
CJU94_38960  hypothetical protein [KO:K01997]
CJU94_01615  ABC transporter [KO:K01995 K01998]
CJU94_10875  branched-chain amino acid ABC transporter permease [KO:K01995 K01998]
CJU94_05655  metal-dependent hydrolase [KO:K01995 K01998]
CJU94_30400  branched-chain amino acid ABC transporter permease [KO:K01998]
CJU94_09255  ABC transporter ATP-binding protein [KO:K01998]
CJU94_05635  branched-chain amino acid ABC transporter permease [KO:K01998]
CJU94_24720  ABC transporter ATP-binding protein [KO:K01998]
CJU94_38965  hypothetical protein [KO:K01998]
CJU94_09260  ABC transporter ATP-binding protein [KO:K01995]
CJU94_10880  ABC transporter ATP-binding protein [KO:K01995]
CJU94_24725  ABC transporter ATP-binding protein [KO:K01995]
CJU94_05615  ABC transporter ATP-binding protein [KO:K01995]
CJU94_21800  ABC transporter ATP-binding protein [KO:K01995]
CJU94_26135  ABC transporter ATP-binding protein [KO:K01995]
CJU94_30405  ABC transporter ATP-binding protein [KO:K01995]
CJU94_38970  hypothetical protein [KO:K01995]
CJU94_38975  hypothetical protein [KO:K01996]
CJU94_26130  ABC transporter ATP-binding protein [KO:K01996]
CJU94_30410  ABC transporter ATP-binding protein [KO:K01996]
CJU94_09265  ABC transporter ATP-binding protein [KO:K01996]
CJU94_05620  ABC transporter ATP-binding protein [KO:K01996]
CJU94_05660  ABC transporter ATP-binding protein [KO:K01996]
CJU94_01620  ABC transporter ATP-binding protein [KO:K01996]
CJU94_10885  ABC transporter ATP-binding protein [KO:K01996]
CJU94_24730  ABC transporter ATP-binding protein [KO:K01996]
CJU94_21805  ABC transporter ATP-binding protein [KO:K01996]
CJU94_23425  enoyl-CoA hydratase [KO:K13816]
CJU94_23420  cyclic di-GMP phosphodiesterase [KO:K14051] [EC:3.1.4.52]
CJU94_07555  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CJU94_16760  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CJU94_33365  AMP-dependent synthetase [KO:K01897] [EC:6.2.1.3]
CJU94_08890  AMP-binding protein [KO:K01897] [EC:6.2.1.3]
CJU94_28460  Crp/Fnr family transcriptional regulator [KO:K10914]
CJU94_14285  hypothetical protein [KO:K10914]
CJU94_33650  hypothetical protein [KO:K10914]
CJU94_13615  Crp/Fnr family transcriptional regulator [KO:K10914]
CJU94_20875  Fur family transcriptional regulator [KO:K09823]
CJU94_08730  Fur family transcriptional regulator [KO:K09823]
CJU94_17145  IclR family transcriptional regulator [KO:K20329]
CJU94_21170  ribA; GTP cyclohydrolase II [KO:K01497] [EC:3.5.4.25]
CJU94_09460  ribD; riboflavin biosynthesis protein RibD [KO:K11752] [EC:3.5.4.26 1.1.1.193]
CJU94_23020  RND transporter [KO:K18139]
CJU94_40100  multidrug transporter [KO:K18139]
CJU94_15595  RND transporter [KO:K18139]
CJU94_20135  multidrug transporter [KO:K18139]
CJU94_08685  multidrug transporter [KO:K18139]
CJU94_27190  hypothetical protein [KO:K18139]
CJU94_31670  RND transporter [KO:K18139]
CJU94_25490  peptide ABC transporter substrate-binding protein [KO:K15580]
CJU94_25495  oppB; oligopeptide transporter permease [KO:K15581]
CJU94_25500  peptide ABC transporter permease [KO:K15582]
CJU94_25505  oppD; ABC transporter ATP-binding protein [KO:K15583]
CJU94_25510  peptide ABC transporter ATP-binding protein [KO:K10823]
CJU94_34465  ABC transporter substrate-binding protein [KO:K02035]
CJU94_09095  peptide ABC transporter substrate-binding protein [KO:K02035]
CJU94_32035  ABC transporter substrate-binding protein [KO:K02035]
CJU94_22000  ABC transporter substrate-binding protein [KO:K02035]
CJU94_21715  ABC transporter substrate-binding protein [KO:K02035]
CJU94_21760  ABC transporter substrate-binding protein [KO:K02035]
CJU94_34470  peptide ABC transporter [KO:K02033]
CJU94_09090  peptide ABC transporter permease [KO:K02033]
CJU94_32040  ABC transporter permease [KO:K02033]
CJU94_22005  peptide ABC transporter permease [KO:K02033]
CJU94_21720  ABC transporter permease [KO:K02033]
CJU94_34475  diguanylate cyclase [KO:K02034]
CJU94_09085  peptide ABC transporter permease [KO:K02034]
CJU94_32045  DNA-directed RNA polymerase subunit alpha [KO:K02034]
CJU94_22010  D-ala-D-ala transporter subunit [KO:K02034]
CJU94_21725  ABC transporter permease [KO:K02034]
CJU94_34455  dppD; dipeptide ABC transporter ATP-binding protein DppD [KO:K02031]
CJU94_09080  ABC transporter ATP-binding protein [KO:K02031 K02032]
CJU94_32050  ABC transporter [KO:K02031 K02032]
CJU94_22015  peptide ABC transporter ATP-binding protein [KO:K02031]
CJU94_21730  glutathione ABC transporter ATP-binding protein GsiA [KO:K02031 K02032]
CJU94_34460  oligopeptide ABC transporter ATP-binding protein [KO:K02032]
CJU94_05265  membrane protein insertase YidC [KO:K03217]
CJU94_06650  preprotein translocase subunit SecE [KO:K03073]
CJU94_18550  preprotein translocase subunit SecG [KO:K03075]
CJU94_06820  preprotein translocase subunit SecY [KO:K03076]
CJU94_02700  preprotein translocase subunit YajC [KO:K03210]
CJU94_07660  preprotein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
CJU94_03395  signal recognition particle-docking protein FtsY [KO:K03110]
CJU94_03880  protein-export chaperone SecB [KO:K03071]
CJU94_07770  signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
CJU94_21410  phospholipase [KO:K01114] [EC:3.1.4.3]
CJU94_00790  phospholipase [KO:K01114] [EC:3.1.4.3]
CJU94_11360  phospholipase C, phosphocholine-specific [KO:K01114] [EC:3.1.4.3]
CJU94_28220  phospholipase C, phosphocholine-specific [KO:K01114] [EC:3.1.4.3]
CJU94_34160  phosphoesterase [KO:K01114] [EC:3.1.4.3]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00059  Sulfate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00547  L-Noradrenaline
C00788  L-Adrenaline
C01019  L-Fucose
C11837  N-Butyryl-L-homoserine lactone
C11841  N-(3-Oxooctanoyl)homoserine lactone
C11844  N-Heptanoylhomoserine lactone
C11845  N-(3-Hydroxy-7-cis-tetradecenoyl)homoserine lactone
C11848  2-Heptyl-3-hydroxy-quinolone
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C18049  N-Acyl-L-homoserine lactone
C18206  cis-11-Methyl-2-dodecenoic acid
C20643  2-Heptyl-4(1H)-quinolone
C20677  N-(4-Coumaroyl)-L-homoserine lactone
C20959  (4S)-4-Hydroxy-5-phosphooxypentane-2,3-dione
C21195  N-(3-Hydroxybutanoyl)-L-homoserine lactone
C21197  N-Hexanoyl-L-homoserine lactone
C21198  N-(3-Oxohexanoyl)-L-homoserine lactone
C21199  N-Octanoyl-L-homoserine lactone
C21200  N-3-Hydroxyoctanoyl-L-homoserine lactone
C21201  N-3-Oxo-dodecanoyl-L-homoserine lactone
C21202  cis-2-Dodecenoic acid
C21220  AIP-1
C21221  CSP
C21222  CSP
C21223  Blp
C21224  SHP2
C21225  SHP3
C21226  cCF10
C21227  iCF10
C21228  cAD1
C21229  iAD1
C21230  ComX pheromone
C21231  PhrA pentapeptide
C21232  PhrC pentapeptide
C21233  PhrE pentapeptide
C21234  PhrF pentapeptide
C21235  PhrG pentapeptide
C21236  PhrH pentapeptide
C21237  PhrK pentapeptide
C21238  NprX peptide
C21239  PapR peptide
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21244  AgrD peptide
C21245  AgrD1 peptide
C21246  GBAP
C21382  R-THMF
Reference
PMID:22712853
  Authors
Pereira CS, Thompson JA, Xavier KB
  Title
AI-2-mediated signalling in bacteria.
  Journal
FEMS Microbiol Rev 37:156-81 (2013)
DOI:10.1111/j.1574-6976.2012.00345.x
Reference
PMID:23965960
  Authors
Verma SC, Miyashiro T
  Title
Quorum sensing in the squid-Vibrio symbiosis.
  Journal
Int J Mol Sci 14:16386-401 (2013)
DOI:10.3390/ijms140816386
Reference
PMID:24348467
  Authors
Norsworthy AN, Visick KL
  Title
Gimme shelter: how Vibrio fischeri successfully navigates an animal's multiple environments.
  Journal
Front Microbiol 4:356 (2013)
DOI:10.3389/fmicb.2013.00356
Reference
PMID:24065108
  Authors
Papaioannou E, Utari PD, Quax WJ
  Title
Choosing an appropriate infection model to study quorum sensing inhibition in Pseudomonas infections.
  Journal
Int J Mol Sci 14:19309-40 (2013)
DOI:10.3390/ijms140919309
Reference
PMID:20738404
  Authors
Heeb S, Fletcher MP, Chhabra SR, Diggle SP, Williams P, Camara M
  Title
Quinolones: from antibiotics to autoinducers.
  Journal
FEMS Microbiol Rev 35:247-74 (2011)
DOI:10.1111/j.1574-6976.2010.00247.x
Reference
PMID:25866808
  Authors
Rasamiravaka T, Labtani Q, Duez P, El Jaziri M
  Title
The formation of biofilms by Pseudomonas aeruginosa: a review of the natural and synthetic compounds interfering with control mechanisms.
  Journal
Biomed Res Int 2015:759348 (2015)
DOI:10.1155/2015/759348
Reference
PMID:11544214
  Authors
Whiteley M, Greenberg EP
  Title
Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes.
  Journal
J Bacteriol 183:5529-34 (2001)
DOI:10.1128/JB.183.19.5529-5534.2001
Reference
PMID:11497469
  Authors
Chin-A-Woeng TF, van den Broek D, de Voer G, van der Drift KM, Tuinman S, Thomas-Oates JE, Lugtenberg BJ, Bloemberg GV
  Title
Phenazine-1-carboxamide production in the biocontrol strain Pseudomonas chlororaphis PCL1391 is regulated by multiple factors secreted into the growth medium.
  Journal
Mol Plant Microbe Interact 14:969-79 (2001)
DOI:10.1094/MPMI.2001.14.8.969
Reference
PMID:19696934
  Authors
Hughes DT, Clarke MB, Yamamoto K, Rasko DA, Sperandio V
  Title
The QseC adrenergic signaling cascade in Enterohemorrhagic E. coli (EHEC).
  Journal
PLoS Pathog 5:e1000553 (2009)
DOI:10.1371/journal.ppat.1000553
Reference
PMID:22144490
  Authors
Njoroge J, Sperandio V
  Title
Enterohemorrhagic Escherichia coli virulence regulation by two bacterial adrenergic kinases, QseC and QseE.
  Journal
Infect Immun 80:688-703 (2012)
DOI:10.1128/IAI.05921-11
Reference
PMID:23160491
  Authors
Pacheco AR, Curtis MM, Ritchie JM, Munera D, Waldor MK, Moreira CG, Sperandio V
  Title
Fucose sensing regulates bacterial intestinal colonization.
  Journal
Nature 492:113-7 (2012)
DOI:10.1038/nature11623
Reference
PMID:22778415
  Authors
Hirakawa H, Harwood CS, Pechter KB, Schaefer AL, Greenberg EP
  Title
Antisense RNA that affects Rhodopseudomonas palustris quorum-sensing signal receptor expression.
  Journal
Proc Natl Acad Sci U S A 109:12141-6 (2012)
DOI:10.1073/pnas.1200243109
Reference
PMID:14617175
  Authors
Danino VE, Wilkinson A, Edwards A, Downie JA
  Title
Recipient-induced transfer of the symbiotic plasmid pRL1JI in Rhizobium leguminosarum bv. viciae is regulated by a quorum-sensing relay.
  Journal
Mol Microbiol 50:511-25 (2003)
DOI:10.1046/j.1365-2958.2003.03699.x
Reference
PMID:12448738
  Authors
Wisniewski-Dye F, Downie JA
  Title
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Related
pathway
parb02040  Flagellar assembly
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ko02024   
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