KEGG   PATHWAY: pay00010
Entry
pay00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Photorhabdus asymbiotica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pay00010  Glycolysis / Gluconeogenesis
pay00010

Module
pay_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pay00010]
pay_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pay00010]
pay_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pay00010]
pay_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pay00010]
Other DBs
GO: 0006096 0006094
Organism
Photorhabdus asymbiotica [GN:pay]
Gene
PAU_01412  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
PAU_03932  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PAU_04264  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
PAU_04051  fbp; fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase) [KO:K03841] [EC:3.1.3.11]
PAU_01758  fbaB; fructose-biphosphate aldolase class i (fbp aldolase) [KO:K11645] [EC:4.1.2.13]
PAU_00879  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
PAU_04262  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PAU_01974  gapA; glyceraldehyde-3-phosphate dehydrogenase a (gapdh-a) [KO:K00134] [EC:1.2.1.12]
PAU_00878  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PAU_02950  gpmA; phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
PAU_00529  gpmB; probable phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
PAU_00841  eno; enolase [KO:K01689] [EC:4.2.1.11]
PAU_01920  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PAU_02458  pykA; pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
PAU_01902  ppsA; phosphoenolpyruvate synthase (pep synthase) [KO:K01007] [EC:2.7.9.2]
PAU_01138  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
PAU_01139  aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenas complex (e2) [KO:K00627] [EC:2.3.1.12]
PAU_01140  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PAU_03905  adhC; glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PAU_02030  adhE; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
PAU_02881  yiaY; probable alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
PAU_01081  aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) [KO:K00128] [EC:1.2.1.3]
PAU_00062  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
PAU_00183  yihX; conserved hypothetical protein [KO:K20866] [EC:3.1.3.10]
PAU_02994  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PAU_01973  yeaD; conserved hypothetical protein [KO:K01792] [EC:5.1.3.15]
PAU_00083  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
PAU_01785  celF; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
PAU_00546  bglB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PAU_01402  crr; glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pay00020  Citrate cycle (TCA cycle)
pay00030  Pentose phosphate pathway
pay00500  Starch and sucrose metabolism
pay00620  Pyruvate metabolism
pay00640  Propanoate metabolism
pay00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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