KEGG   PATHWAY: pba00010
Entry
pba00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas brassicacearum subsp. brassicacearum NFM421
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pba00010  Glycolysis / Gluconeogenesis
pba00010

Module
pba_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pba00010]
pba_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pba00010]
pba_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pba00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas brassicacearum subsp. brassicacearum NFM421 [GN:pba]
Gene
PSEBR_a1209  glucokinase: putative membrane protein [KO:K00845] [EC:2.7.1.2]
PSEBR_a4819  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PSEBR_a369  Fructose-bisphosphatase (Fructose-16-bisphosphatase) [KO:K03841] [EC:3.1.3.11]
PSEBR_a5265  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
PSEBR_a776  Triose-phosphate isomerase; TIM, Triosephosphate isomerase, phosphate binding superfamily [KO:K01803] [EC:5.3.1.1]
PSEBR_a1760  Putatice glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
PSEBR_a1207  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)(glyceraldehyde 3-phosphate dehydrogenase 1) [KO:K00134] [EC:1.2.1.12]
PSEBR_a5268  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PSEBR_a351  Phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
PSEBR_a1085  Phosphopyruvate hydratase (enolase) [KO:K01689] [EC:4.2.1.11]
PSEBR_a4482  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PSEBR_a4160  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PSEBR_a1677  Pyruvate, water dikinase (phosphoenolpyruvate synthase) [KO:K01007] [EC:2.7.9.2]
PSEBR_a2189  Pyruvate dehydrogenase (acetyl-transferring) [KO:K00163] [EC:1.2.4.1]
PSEBR_a483  Pyruvate dehydrogenase (acetyl-transferring) [KO:K00163] [EC:1.2.4.1]
PSEBR_a482  Dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
PSEBR_a3210  Dihydrolipoyllysine-residue acetyltransferase, component of acetoin cleaving system [KO:K00627] [EC:2.3.1.12]
PSEBR_a3381  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PSEBR_a4138  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PSEBR_a5619  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PSEBR_a1089  S-(hydroxymethyl)glutathione dehydrogenase (alcohol dehydrogenase class III) [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PSEBR_a3630  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PSEBR_a2525  putative alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
PSEBR_a1300  alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
PSEBR_a3675  Alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
PSEBR_a1789  Putative oxidoreductase [KO:K13979] [EC:1.1.1.2]
PSEBR_a4022  Putative oxidoreductase [KO:K13979] [EC:1.1.1.2]
PSEBR_a2665  Alcohol dehydrogenase (acceptor), (Quinoprotein ethanol dehydrogenase) [KO:K00114] [EC:1.1.2.8]
PSEBR_a2660  Putative Alcohol dehydrogenase (acceptor), (Quinoprotein ethanol dehydrogenase) [KO:K00114] [EC:1.1.2.8]
PSEBR_a2077  putative gluconate 2-dehydrogenase (acceptor) [KO:K22474] [EC:1.1.5.5]
PSEBR_a3647  Putative dehydrogenase [KO:K00128] [EC:1.2.1.3]
PSEBR_a2074  putative aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
PSEBR_a3511  Putative aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
PSEBR_a2154  putative aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
PSEBR_a2666  Aldehyde dehydrogenase NAD(+) [KO:K00138] [EC:1.2.1.-]
PSEBR_a4982  putative aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
PSEBR_a2939  putative AMP-binding protein [KO:K01895] [EC:6.2.1.1]
PSEBR_a4820  Acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PSEBR_a4325  Acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PSEBR_a2049  putative acid--thiol ligase [KO:K24012] [EC:6.2.1.13]
PSEBR_a1887  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
PSEBR_a3376  putative epimerase [KO:K01785] [EC:5.1.3.3]
PSEBR_a3020  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PSEBR_a5523  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PSEBR_a115  Putative aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
PSEBR_a3015  putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
PSEBR_a287  Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pba00020  Citrate cycle (TCA cycle)
pba00030  Pentose phosphate pathway
pba00500  Starch and sucrose metabolism
pba00620  Pyruvate metabolism
pba00640  Propanoate metabolism
pba00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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