KEGG   PATHWAY: pbae00010
Entry
pbae00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Roseinatronobacter sp. S2
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pbae00010  Glycolysis / Gluconeogenesis
pbae00010

Module
pbae_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pbae00010]
pbae_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pbae00010]
pbae_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pbae00010]
pbae_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbae00010]
Other DBs
GO: 0006096 0006094
Organism
Roseinatronobacter sp. S2 [GN:pbae]
Gene
P8S53_07595  glucokinase [KO:K00845] [EC:2.7.1.2]
P8S53_11015  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
P8S53_12060  hexose kinase [KO:K16370] [EC:2.7.1.11]
P8S53_18465  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
P8S53_04365  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
P8S53_09965  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
P8S53_18460  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
P8S53_12695  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
P8S53_08555  glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein [KO:K00134] [EC:1.2.1.12]
P8S53_14405  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
P8S53_14415  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
P8S53_11070  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
P8S53_06670  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
P8S53_03295  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
P8S53_01340  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
P8S53_12030  PEP-utilizing enzyme [KO:K01006] [EC:2.7.9.1]
P8S53_18210  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
P8S53_08820  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
P8S53_08815  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
P8S53_08810  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
P8S53_18215  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
P8S53_07675  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
P8S53_09095  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
P8S53_18220  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
P8S53_15085  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
P8S53_03070  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
P8S53_14030  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
P8S53_19115  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
P8S53_16425  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
P8S53_07270  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
P8S53_07795  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
P8S53_13200  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
P8S53_07515  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pbae00020  Citrate cycle (TCA cycle)
pbae00030  Pentose phosphate pathway
pbae00500  Starch and sucrose metabolism
pbae00620  Pyruvate metabolism
pbae00640  Propanoate metabolism
pbae00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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