KEGG   PATHWAY: pcas00630
Entry
pcas00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas canavaninivorans
Class
Metabolism; Carbohydrate metabolism
Pathway map
pcas00630  Glyoxylate and dicarboxylate metabolism
pcas00630

Module
pcas_M00621  Glycine cleavage system [PATH:pcas00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas canavaninivorans [GN:pcas]
Gene
LOY40_18660  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
LOY40_14165  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
LOY40_06625  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LOY40_24570  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LOY40_26655  malate synthase G [KO:K01638] [EC:2.3.3.9]
LOY40_16240  citrate synthase [KO:K01647] [EC:2.3.3.1]
LOY40_07815  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
LOY40_09250  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
LOY40_11750  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
LOY40_14175  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
LOY40_03490  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LOY40_08505  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LOY40_10450  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LOY40_22230  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
LOY40_16620  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
LOY40_16625  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
LOY40_16630  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
LOY40_24930  katB; catalase KatB [KO:K03781] [EC:1.11.1.6]
LOY40_25885  catalase [KO:K03781] [EC:1.11.1.6]
LOY40_10135  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
LOY40_00135  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
LOY40_14515  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LOY40_04730  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
LOY40_23985  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
LOY40_26250  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
LOY40_08240  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
LOY40_00570  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
LOY40_01975  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LOY40_06765  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LOY40_21545  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LOY40_27760  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LOY40_27770  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LOY40_24895  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LOY40_26780  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LOY40_06120  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LOY40_06110  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LOY40_27880  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LOY40_29055  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LOY40_07850  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LOY40_10895  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LOY40_06125  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LOY40_27875  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LOY40_07765  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
LOY40_15755  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
LOY40_07760  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
LOY40_07755  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
LOY40_11365  glycerate kinase [KO:K00865] [EC:2.7.1.165]
LOY40_07750  glycerate kinase [KO:K11529] [EC:2.7.1.165]
LOY40_16595  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
LOY40_17400  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
LOY40_15250  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
LOY40_22265  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LOY40_13545  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
LOY40_13540  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
LOY40_13535  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
LOY40_13530  formate dehydrogenase subunit gamma [KO:K00127]
LOY40_05875  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LOY40_26755  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LOY40_02090  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pcas00010  Glycolysis / Gluconeogenesis
pcas00020  Citrate cycle (TCA cycle)
pcas00030  Pentose phosphate pathway
pcas00053  Ascorbate and aldarate metabolism
pcas00071  Fatty acid degradation
pcas00230  Purine metabolism
pcas00250  Alanine, aspartate and glutamate metabolism
pcas00260  Glycine, serine and threonine metabolism
pcas00620  Pyruvate metabolism
pcas00710  Carbon fixation by Calvin cycle
pcas00750  Vitamin B6 metabolism
pcas00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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