KEGG   PATHWAY: pcri03250
Entry
pcri03250                   Pathway                                
Name
Viral life cycle - HIV-1 - Pelecanus crispus (Dalmatian pelican)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
pcri03250  Viral life cycle - HIV-1
pcri03250

Organism
Pelecanus crispus (Dalmatian pelican) [GN:pcri]
Gene
104025081  C-C chemokine receptor type 1-like [KO:K04180]
104026475  CXCR4; C-X-C chemokine receptor type 4 [KO:K04189]
104038311  T-cell surface glycoprotein CD4-like [KO:K06454]
104036642  MAP1A; microtubule-associated protein 1A [KO:K10429]
104025765  MAP1B; microtubule-associated protein 1B [KO:K10429]
104030612  fasciculation and elongation protein zeta-1-like [KO:K25663]
104023723  BICD1; protein bicaudal D homolog 1 [KO:K18739]
104034596  BICD2; protein bicaudal D homolog 2 [KO:K18739]
104033948  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [KO:K22544] [EC:3.1.5.-]
104025087  PSIP1; PC4 and SFRS1-interacting protein [KO:K25057]
104039104  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
104031641  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
104029831  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104034243  interferon-induced GTP-binding protein Mx-like [KO:K14754]
104036813  RANBP2; E3 SUMO-protein ligase RanBP2 [KO:K12172] [EC:2.3.2.-]
104024968  NUP153; nuclear pore complex protein Nup153 [KO:K14296]
104036575  LOW QUALITY PROTEIN: histone acetyltransferase p300-like [KO:K04498] [EC:2.3.1.48]
104030549  CREBBP; CREB-binding protein [KO:K04498] [EC:2.3.1.48]
104024888  histone acetyltransferase KAT2B [KO:K06062] [EC:2.3.1.48]
104030650  CDK9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
104023808  CCNT1; cyclin-T1 [KO:K15188]
104030343  CCNT2; cyclin-T2 isoform X1 [KO:K15188]
104026961  AFF4; AF4/FMR2 family member 4 [KO:K15185]
104032276  ELL; RNA polymerase II elongation factor ELL [KO:K15183]
104033117  ELL2; RNA polymerase II elongation factor ELL2 [KO:K15183]
104033171  MLLT1; protein ENL [KO:K15187]
104029149  NELFA; negative elongation factor A [KO:K15179]
104028302  NELFB; negative elongation factor B [KO:K15180]
104035584  NELFCD; negative elongation factor C/D [KO:K15181]
104024251  SUPT4H1; transcription elongation factor SPT4 [KO:K15171]
104024406  XPO1; exportin-1 [KO:K14290]
104026187  RAN; GTP-binding nuclear protein Ran [KO:K07936]
104025058  SERINC3; serine incorporator 3 [KO:K25661]
104028364  SERINC5; serine incorporator 5 [KO:K25655]
104033733  HGS; LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate [KO:K12182]
104030417  TSG101; tumor susceptibility gene 101 protein [KO:K12183]
104028453  CHMP6; charged multivesicular body protein 6 [KO:K12195]
104034401  CHMP4B; charged multivesicular body protein 4b [KO:K12194]
104038000  PDCD6IP; LOW QUALITY PROTEIN: programmed cell death 6-interacting protein [KO:K12200]
104030107  vacuolar protein sorting-associated protein 4B [KO:K12196]
Reference
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
pcri03013  Nucleocytoplasmic transport
pcri04144  Endocytosis
KO pathway
ko03250   
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