KEGG   PATHWAY: pcz00010
Entry
pcz00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas chlororaphis PCL1606
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pcz00010  Glycolysis / Gluconeogenesis
pcz00010

Module
pcz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pcz00010]
pcz_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pcz00010]
pcz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pcz00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas chlororaphis PCL1606 [GN:pcz]
Gene
PCL1606_15570  glucokinase [KO:K00845] [EC:2.7.1.2]
PCL1606_09890  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PCL1606_56940  fructose-1 6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
PCL1606_04310  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
PCL1606_52730  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PCL1606_15550  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PCL1606_40800  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PCL1606_04280  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PCL1606_57210  phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
PCL1606_49040  enolase [KO:K01689] [EC:4.2.1.11]
PCL1606_14590  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PCL1606_44110  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PCL1606_41710  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PCL1606_55830  pyruvate dehydrogenase [KO:K00163] [EC:1.2.4.1]
PCL1606_55850  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
PCL1606_00200  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PCL1606_43770  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PCL1606_36770  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PCL1606_49000  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PCL1606_47140  alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
PCL1606_25880  zinc-binding dehydrogenase [KO:K13979] [EC:1.1.1.2]
PCL1606_42160  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
PCL1606_60240  alcohol dehydrogenase [KO:K22474] [EC:1.1.5.5]
PCL1606_35160  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PCL1606_34590  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PCL1606_07960  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
PCL1606_16590  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PCL1606_09880  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PCL1606_30950  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
PCL1606_34620  acyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
PCL1606_42180  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
PCL1606_28010  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PCL1606_01460  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PCL1606_00870  aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
PCL1606_24110  aldehyde dehydrogenase [KO:K00131] [EC:1.2.1.9]
PCL1606_57920  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pcz00020  Citrate cycle (TCA cycle)
pcz00030  Pentose phosphate pathway
pcz00500  Starch and sucrose metabolism
pcz00620  Pyruvate metabolism
pcz00640  Propanoate metabolism
pcz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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