KEGG   PATHWAY: pfx00630
Entry
pfx00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas lurida
Class
Metabolism; Carbohydrate metabolism
Pathway map
pfx00630  Glyoxylate and dicarboxylate metabolism
pfx00630

Module
pfx_M00621  Glycine cleavage system [PATH:pfx00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas lurida [GN:pfx]
Gene
A7318_15475  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
A7318_22970  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
A7318_09915  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
A7318_20675  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
A7318_17620  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
A7318_24865  malate synthase G [KO:K01638] [EC:2.3.3.9]
A7318_08050  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
A7318_06870  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
A7318_14205  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
A7318_11975  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
A7318_13310  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7318_09590  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7318_20160  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7318_14585  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7318_01790  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A7318_21060  3-hydroxybutyryl-CoA dehydratase [KO:K17865] [EC:4.2.1.55]
A7318_23340  catalase [KO:K03781] [EC:1.11.1.6]
A7318_27745  catalase HPII [KO:K03781] [EC:1.11.1.6]
A7318_23670  catalase [KO:K03781] [EC:1.11.1.6]
A7318_16780  catalase [KO:K03781] [EC:1.11.1.6]
A7318_04170  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
A7318_03960  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
A7318_24560  phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
A7318_20415  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
A7318_27620  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
A7318_25920  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7318_25925  gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
A7318_09655  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7318_01020  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
A7318_06725  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7318_11710  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A7318_24985  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A7318_23305  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A7318_22780  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
A7318_22770  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
A7318_26035  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
A7318_08085  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A7318_16955  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A7318_22785  glycine cleavage system protein H [KO:K02437]
A7318_26030  glycine cleavage system protein H [KO:K02437]
A7318_07990  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
A7318_07985  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
A7318_13200  glycerate kinase [KO:K00865] [EC:2.7.1.165]
A7318_07975  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
A7318_11915  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
A7318_21080  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A7318_21335  arylformamidase [KO:K07130] [EC:3.5.1.9]
A7318_22575  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
A7318_24960  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
A7318_10480  formamidase [KO:K01455] [EC:3.5.1.49]
A7318_01130  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pfx00010  Glycolysis / Gluconeogenesis
pfx00020  Citrate cycle (TCA cycle)
pfx00030  Pentose phosphate pathway
pfx00053  Ascorbate and aldarate metabolism
pfx00071  Fatty acid degradation
pfx00230  Purine metabolism
pfx00250  Alanine, aspartate and glutamate metabolism
pfx00260  Glycine, serine and threonine metabolism
pfx00620  Pyruvate metabolism
pfx00710  Carbon fixation by Calvin cycle
pfx00750  Vitamin B6 metabolism
pfx00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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