KEGG   PATHWAY: pgv00010
Entry
pgv00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Polymorphum gilvum
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pgv00010  Glycolysis / Gluconeogenesis
pgv00010

Module
pgv_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pgv00010]
pgv_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pgv00010]
pgv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pgv00010]
Other DBs
GO: 0006096 0006094
Organism
Polymorphum gilvum [GN:pgv]
Gene
SL003B_3698  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
SL003B_1438  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SL003B_0992  Fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
SL003B_2658  glpX; Fructose 1,6-bisphosphatase II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
SL003B_0989  Fructose-bisphosphate aldolase 2 [KO:K01624] [EC:4.1.2.13]
SL003B_0904  Fructose-bisphosphate aldolase, class II, Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
SL003B_2186  tpiA; Triosephosphate isomerase 1 [KO:K01803] [EC:5.3.1.1]
SL003B_0908  Glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
SL003B_0905  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SL003B_4296  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SL003B_2232  eno; Enolase [KO:K01689] [EC:4.2.1.11]
SL003B_0863  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SL003B_1612  ppdK; Pyruvate phosphate dikinase (Pyruvate, orthophosphate dikinase) [KO:K01006] [EC:2.7.9.1]
SL003B_4089  Pyruvate dehydrogenase (Acetyl-transferring) [KO:K00163] [EC:1.2.4.1]
SL003B_2321  Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
SL003B_2320  Biotin/lipoyl attachment:2-oxo acid dehydrogenase, acyltransferase component, lipoyl-binding:Transketolase, central region:Tr [KO:K00162] [EC:1.2.4.1]
SL003B_2319  pdhB; Dihydrolipoamide acetyltransferase protein [KO:K00627] [EC:2.3.1.12]
SL003B_1093  Probable pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
SL003B_1038  2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
SL003B_4229  Dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
SL003B_2318  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SL003B_1013  Alcohol dehydrogenase GroES-like protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SL003B_3527  Aldehyde dehydrogenase 2B4 [KO:K00128] [EC:1.2.1.3]
SL003B_0169  Putative acetyl-coenzyme A synthetase (AcsA-like) [KO:K01895] [EC:6.2.1.1]
SL003B_0087  Acetate-CoA ligase, AMP-dependent [KO:K01895] [EC:6.2.1.1]
SL003B_3145  Acetyl-CoA synthetase (Acetate-CoA ligase) [KO:K01895] [EC:6.2.1.1]
SL003B_0383  acs; AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
SL003B_1091  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
SL003B_3675  Aldose 1-epimerase subfamily [KO:K01785] [EC:5.1.3.3]
SL003B_3676  Phosphoglucomutase/phosphomannomutase, C-terminal domain family [KO:K15778] [EC:5.4.2.8 5.4.2.2]
SL003B_4208  Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pgv00020  Citrate cycle (TCA cycle)
pgv00030  Pentose phosphate pathway
pgv00500  Starch and sucrose metabolism
pgv00620  Pyruvate metabolism
pgv00640  Propanoate metabolism
pgv00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

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