KEGG   PATHWAY: phom00010
Entry
phom00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas hormoni
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
phom00010  Glycolysis / Gluconeogenesis
phom00010

Module
phom_M00002  Glycolysis, core module involving three-carbon compounds [PATH:phom00010]
phom_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:phom00010]
phom_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:phom00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas hormoni [GN:phom]
Gene
KJF94_20000  glucokinase [KO:K00845] [EC:2.7.1.2]
KJF94_22090  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
KJF94_28295  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
KJF94_24445  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
KJF94_00425  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
KJF94_20010  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KJF94_06345  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KJF94_24460  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
KJF94_28210  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
KJF94_02660  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
KJF94_20440  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
KJF94_04965  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
KJF94_05745  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
KJF94_28940  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
KJF94_09120  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
KJF94_28935  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
KJF94_12860  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KJF94_26420  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KJF94_05080  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KJF94_02680  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
KJF94_03500  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
KJF94_13165  NAD(P)-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
KJF94_18115  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
KJF94_12760  PQQ-dependent methanol/ethanol family dehydrogenase [KO:K00114] [EC:1.1.2.8]
KJF94_14750  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
KJF94_12755  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
KJF94_23085  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
KJF94_19540  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KJF94_22095  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KJF94_11790  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
KJF94_09150  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
KJF94_12715  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
KJF94_10855  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
KJF94_25775  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
KJF94_26140  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
KJF94_09465  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
KJF94_27740  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
phom00020  Citrate cycle (TCA cycle)
phom00030  Pentose phosphate pathway
phom00500  Starch and sucrose metabolism
phom00620  Pyruvate metabolism
phom00640  Propanoate metabolism
phom00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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