KEGG   PATHWAY: phyl00010
Entry
phyl00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Phyllobacterium sp. 628
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
phyl00010  Glycolysis / Gluconeogenesis
phyl00010

Module
phyl_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:phyl00010]
phyl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:phyl00010]
phyl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:phyl00010]
phyl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:phyl00010]
Other DBs
GO: 0006096 0006094
Organism
Phyllobacterium sp. 628 [GN:phyl]
Gene
HB779_04800  glucokinase [KO:K00845] [EC:2.7.1.2]
HB779_05235  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HB779_24705  diphosphate--fructose-6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
HB779_15490  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
HB779_02805  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
HB779_13555  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
HB779_02815  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HB779_02810  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HB779_04785  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
HB779_13590  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HB779_02690  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HB779_10195  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
HB779_13600  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HB779_13605  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
HB779_13610  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
HB779_13620  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HB779_15040  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HB779_03920  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HB779_06640  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HB779_21450  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
HB779_04815  zinc-dependent alcohol dehydrogenase family protein [KO:K00001] [EC:1.1.1.1]
HB779_17645  zinc-binding dehydrogenase [KO:K00001] [EC:1.1.1.1]
HB779_25225  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
HB779_08460  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HB779_13025  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HB779_13180  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HB779_22625  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HB779_17610  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
HB779_00805  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
HB779_06585  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
HB779_04440  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
phyl00020  Citrate cycle (TCA cycle)
phyl00030  Pentose phosphate pathway
phyl00500  Starch and sucrose metabolism
phyl00620  Pyruvate metabolism
phyl00640  Propanoate metabolism
phyl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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