KEGG   PATHWAY: pib00040
Entry
pib00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Paenibacillus ihbetae
Class
Metabolism; Carbohydrate metabolism
Pathway map
pib00040  Pentose and glucuronate interconversions
pib00040

Module
pib_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pib00040]
Organism
Paenibacillus ihbetae [GN:pib]
Gene
BBD41_06540  pectin methylesterase [KO:K01051] [EC:3.1.1.11]
BBD41_13665  oligogalacturonide lyase [KO:K01730] [EC:4.2.2.6]
BBD41_06495  cupin [KO:K26933] [EC:4.2.99.25]
BBD41_06690  5-dehydro-4-deoxy-D-glucuronate isomerase [KO:K01815] [EC:5.3.1.17]
BBD41_06700  2-deoxy-D-gluconate 3-dehydrogenase [KO:K00065] [EC:1.1.1.127]
BBD41_15505  glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
BBD41_24900  glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
BBD41_24905  altronate oxidoreductase [KO:K00041] [EC:1.1.1.58]
BBD41_24910  altronate hydrolase [KO:K01685] [EC:4.2.1.7]
BBD41_15500  mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
BBD41_09520  beta-glucuronidase [KO:K01195] [EC:3.2.1.31]
BBD41_27310  beta-glucuronidase [KO:K01195] [EC:3.2.1.31]
BBD41_12735  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
BBD41_16910  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
BBD41_08735  xylose isomerase [KO:K03079] [EC:5.1.3.22]
BBD41_22090  xylose isomerase [KO:K03079] [EC:5.1.3.22]
BBD41_22080  xylulose 5-phosphate 3-epimerase [KO:K03079] [EC:5.1.3.22]
BBD41_06670  L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
BBD41_05150  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BBD41_01070  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BBD41_06680  L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
BBD41_26590  ribulokinase [KO:K00853] [EC:2.7.1.16]
BBD41_06665  ribulokinase [KO:K00853] [EC:2.7.1.16]
BBD41_18195  xylulokinase [KO:K00854] [EC:2.7.1.17]
BBD41_01820  hypothetical protein [KO:K00854] [EC:2.7.1.17]
BBD41_18190  xylose isomerase [KO:K01805] [EC:5.3.1.5]
BBD41_25815  carbohydrate kinase [KO:K00848] [EC:2.7.1.5]
BBD41_26030  carbohydrate kinase [KO:K00848] [EC:2.7.1.5]
BBD41_11330  alcohol dehydrogenase [KO:K00008] [EC:1.1.1.14]
BBD41_01825  Zn-dependent alcohol dehydrogenase [KO:K00008] [EC:1.1.1.14]
BBD41_03590  oxidoreductase [KO:K14273] [EC:1.1.1.179]
BBD41_25265  oxidoreductase [KO:K14273] [EC:1.1.1.179]
BBD41_22210  dehydratase [KO:K22396] [EC:4.2.1.82]
BBD41_22200  fumarylacetoacetate hydrolase [KO:K14259] [EC:4.2.1.141]
BBD41_22205  aldehyde dehydrogenase [KO:K22187] [EC:1.2.1.-]
BBD41_26020  L-fucose isomerase [KO:K01818] [EC:5.3.1.25 5.3.1.3]
BBD41_01795  L-fucose isomerase [KO:K01818] [EC:5.3.1.25 5.3.1.3]
BBD41_26025  aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
pib00010  Glycolysis / Gluconeogenesis
pib00020  Citrate cycle (TCA cycle)
pib00030  Pentose phosphate pathway
pib00052  Galactose metabolism
pib00053  Ascorbate and aldarate metabolism
pib00500  Starch and sucrose metabolism
pib00520  Amino sugar and nucleotide sugar metabolism
pib00561  Glycerolipid metabolism
pib00562  Inositol phosphate metabolism
pib00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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