KEGG   PATHWAY: pir00010
Entry
pir00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pirellula sp. SH-Sr6A
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pir00010  Glycolysis / Gluconeogenesis
pir00010

Module
pir_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pir00010]
pir_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pir00010]
pir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pir00010]
Other DBs
GO: 0006096 0006094
Organism
Pirellula sp. SH-Sr6A [GN:pir]
Gene
VN12_23870  glcK_2; Glucokinase [KO:K25026] [EC:2.7.1.2]
VN12_22195  glcK_1; Glucokinase [KO:K25026] [EC:2.7.1.2]
VN12_13670  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
VN12_20940  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
VN12_15075  fda; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
VN12_02745  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
VN12_01750  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
VN12_19440  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
VN12_22025  bifunctional RNase H/acid phosphatase [KO:K01834] [EC:5.4.2.11]
VN12_07940  cofactor-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
VN12_21015  cofactor-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
VN12_00505  eno; Enolase [KO:K01689] [EC:4.2.1.11]
VN12_00215  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
VN12_21480  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
VN12_16415  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
VN12_16420  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
VN12_09535  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
VN12_08960  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
VN12_21820  korA; 2-oxoglutarate oxidoreductase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
VN12_21825  korB; 2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
VN12_07440  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
VN12_06560  ahr; Aldehyde reductase Ahr [KO:K12957] [EC:1.1.1.2 1.1.1.183]
VN12_00145  outer membrane biogenesis protein BamB [KO:K00114] [EC:1.1.2.8]
VN12_11985  betB; NAD/NADP-dependent betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
VN12_00700  acs; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
VN12_14635  mro; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
VN12_20020  yihX; Alpha-D-glucose-1-phosphate phosphatase YihX [KO:K20866] [EC:3.1.3.10]
VN12_12920  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
VN12_10095  ppgK; Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
VN12_10370  yeaD; Putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
VN12_07120  pckG; Phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pir00020  Citrate cycle (TCA cycle)
pir00030  Pentose phosphate pathway
pir00500  Starch and sucrose metabolism
pir00620  Pyruvate metabolism
pir00640  Propanoate metabolism
pir00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system