KEGG   PATHWAY: pkp00240
Entry
pkp00240                    Pathway                                
Name
Pyrimidine metabolism - Paenibacillus konkukensis
Class
Metabolism; Nucleotide metabolism
Pathway map
pkp00240  Pyrimidine metabolism
pkp00240

Module
pkp_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pkp00240]
pkp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pkp00240]
pkp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pkp00240]
Other DBs
GO: 0006220 0006213
Organism
Paenibacillus konkukensis [GN:pkp]
Gene
SK3146_06382  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
SK3146_06381  carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
SK3146_06379  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
SK3146_06380  pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
SK3146_01803  dihydroorotase [KO:K01465] [EC:3.5.2.3]
SK3146_02630  dan; D-aminoacylase [KO:K01465] [EC:3.5.2.3]
SK3146_01944  pyrD_1; Dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
SK3146_06384  pyrE_1; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
SK3146_06826  pyrE_2; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
SK3146_06383  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
SK3146_06665  pyrH_2; Uridylate kinase [KO:K09903] [EC:2.7.4.22]
SK3146_00682  pyrH_1; Uridylate kinase [KO:K09903] [EC:2.7.4.22]
SK3146_06134  ndk_2; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
SK3146_01077  ndk_1; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
SK3146_06040  maf; Septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
SK3146_04116  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
SK3146_01105  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
SK3146_00493  udk_1; Uridine kinase [KO:K00876] [EC:2.7.1.48]
SK3146_00660  udk_2; Uridine kinase [KO:K00876] [EC:2.7.1.48]
SK3146_01535  yfkN_2; Trifunctional nucleotide phosphoesterase protein YfkN precursor [KO:K11751] [EC:3.1.3.5 3.6.1.45]
SK3146_01516  dehH2_1; Haloacetate dehalogenase H-2 [KO:K08723] [EC:3.1.3.-]
SK3146_03133  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
SK3146_03698  upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
SK3146_06378  pyrR; Bifunctional protein PyrR [KO:K02825] [EC:2.4.2.9]
SK3146_05210  yfkN_4; Trifunctional nucleotide phosphoesterase protein YfkN precursor [KO:K01119] [EC:3.1.4.16 3.1.3.6]
SK3146_01534  yfkN_1; Trifunctional nucleotide phosphoesterase protein YfkN precursor [KO:K01119] [EC:3.1.4.16 3.1.3.6]
SK3146_06712  hypothetical protein [KO:K09769] [EC:3.1.4.16]
SK3146_00448  pdp; Pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
SK3146_06296  cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
SK3146_00563  codA; Cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
SK3146_01727  nrdE; Ribonucleoside-diphosphate reductase 2 subunit alpha [KO:K00525] [EC:1.17.4.1]
SK3146_01894  nrdZ; Ribonucleoside-diphosphate reductase NrdZ [KO:K00525] [EC:1.17.4.1]
SK3146_01726  nrdF; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
SK3146_02277  yfbR; 5'-deoxynucleotidase YfbR [KO:K08722] [EC:3.1.3.89]
SK3146_06241  tadA_2; tRNA-specific adenosine deaminase [KO:K01493] [EC:3.5.4.12]
SK3146_04145  tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
SK3146_06686  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
SK3146_04469  tdk; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
SK3146_02963  thyA; Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
SK3146_00996  thyX; Thymidylate synthase ThyX [KO:K03465] [EC:2.1.1.148]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
pkp00030  Pentose phosphate pathway
pkp00220  Arginine biosynthesis
pkp00250  Alanine, aspartate and glutamate metabolism
pkp00280  Valine, leucine and isoleucine degradation
pkp00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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