KEGG   PATHWAY: pnt00010
Entry
pnt00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas nitroreducens
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pnt00010  Glycolysis / Gluconeogenesis
pnt00010

Module
pnt_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pnt00010]
pnt_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pnt00010]
pnt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pnt00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas nitroreducens [GN:pnt]
Gene
G5B91_10290  glucokinase [KO:K00845] [EC:2.7.1.2]
G5B91_28040  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
G5B91_30230  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
G5B91_29940  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
G5B91_28150  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
G5B91_10280  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
G5B91_21955  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
G5B91_29955  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
G5B91_30315  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
G5B91_09415  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
G5B91_10640  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
G5B91_26850  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
G5B91_11875  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
G5B91_20180  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
G5B91_29765  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
G5B91_20185  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
G5B91_29770  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
G5B91_12815  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G5B91_13520  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G5B91_16150  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G5B91_09445  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
G5B91_15125  Zn-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
G5B91_21180  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
G5B91_31715  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
G5B91_15615  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
G5B91_15945  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
G5B91_15970  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
G5B91_06735  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G5B91_23065  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G5B91_32195  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G5B91_27480  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G5B91_04520  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
G5B91_15975  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
G5B91_13240  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
G5B91_23395  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
G5B91_28045  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
G5B91_04095  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
G5B91_32210  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
G5B91_31420  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
G5B91_31690  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
G5B91_15875  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
G5B91_30645  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pnt00020  Citrate cycle (TCA cycle)
pnt00030  Pentose phosphate pathway
pnt00500  Starch and sucrose metabolism
pnt00620  Pyruvate metabolism
pnt00640  Propanoate metabolism
pnt00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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