KEGG   PATHWAY: pphn00630
Entry
pphn00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas phenolilytica
Class
Metabolism; Carbohydrate metabolism
Pathway map
pphn00630  Glyoxylate and dicarboxylate metabolism
pphn00630

Module
pphn_M00621  Glycine cleavage system [PATH:pphn00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas phenolilytica [GN:pphn]
Gene
HU825_12760  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
HU825_16660  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HU825_03020  malate synthase G [KO:K01638] [EC:2.3.3.9]
HU825_03405  malate synthase G [KO:K01638] [EC:2.3.3.9]
HU825_13505  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HU825_16345  prpC; 2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
HU825_15075  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
HU825_16290  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
HU825_12935  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HU825_14450  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HU825_14470  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HU825_14780  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
HU825_01195  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HU825_10525  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
HU825_03040  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
HU825_03035  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
HU825_03030  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HU825_05355  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
HU825_07955  catalase [KO:K03781] [EC:1.11.1.6]
HU825_09590  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HU825_18110  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
HU825_07605  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HU825_03520  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HU825_04425  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HU825_04435  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HU825_13105  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HU825_08410  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HU825_13115  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HU825_13095  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HU825_04040  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HU825_13540  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU825_13120  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HU825_04035  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HU825_05940  glycine cleavage system protein H [KO:K02437]
HU825_00790  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
HU825_00795  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
HU825_10485  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
HU825_00800  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
HU825_00805  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HU825_16955  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HU825_01895  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HU825_06025  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
HU825_06020  fdxH; formate dehydrogenase subunit beta [KO:K00124]
HU825_06015  formate dehydrogenase subunit gamma [KO:K00127]
HU825_09800  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pphn00010  Glycolysis / Gluconeogenesis
pphn00020  Citrate cycle (TCA cycle)
pphn00030  Pentose phosphate pathway
pphn00071  Fatty acid degradation
pphn00230  Purine metabolism
pphn00250  Alanine, aspartate and glutamate metabolism
pphn00260  Glycine, serine and threonine metabolism
pphn00620  Pyruvate metabolism
pphn00710  Carbon fixation by Calvin cycle
pphn00750  Vitamin B6 metabolism
pphn00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system