KEGG   PATHWAY: pphr00010
Entry
pphr00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pannonibacter phragmitetus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pphr00010  Glycolysis / Gluconeogenesis
pphr00010

Module
pphr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pphr00010]
pphr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pphr00010]
pphr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pphr00010]
Other DBs
GO: 0006096 0006094
Organism
Pannonibacter phragmitetus [GN:pphr]
Gene
APZ00_03305  glucokinase [KO:K00845] [EC:2.7.1.2]
APZ00_14745  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
APZ00_13080  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
APZ00_16435  glpX; fructose 1,6-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
APZ00_09465  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
APZ00_13060  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
APZ00_17975  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
APZ00_09480  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
APZ00_09470  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
APZ00_13065  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
APZ00_05005  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
APZ00_18565  eno; enolase [KO:K01689] [EC:4.2.1.11]
APZ00_09290  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
APZ00_04455  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
APZ00_15680  pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
APZ00_07330  transketolase [KO:K00163] [EC:1.2.4.1]
APZ00_18060  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
APZ00_18065  pyruvate dehydrogenase [KO:K00162] [EC:1.2.4.1]
APZ00_18070  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
APZ00_05520  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APZ00_18075  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APZ00_16485  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
APZ00_19560  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
APZ00_02060  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
APZ00_23545  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
APZ00_17945  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
APZ00_06595  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
APZ00_07590  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
APZ00_08005  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
APZ00_11870  6-carboxyhexanoate--CoA ligase [KO:K24012] [EC:6.2.1.13]
APZ00_25005  hypothetical protein [KO:K01785] [EC:5.1.3.3]
APZ00_03410  aldose epimerase [KO:K01785] [EC:5.1.3.3]
APZ00_03405  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
APZ00_05665  phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pphr00020  Citrate cycle (TCA cycle)
pphr00030  Pentose phosphate pathway
pphr00500  Starch and sucrose metabolism
pphr00620  Pyruvate metabolism
pphr00640  Propanoate metabolism
pphr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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