KEGG   PATHWAY: ppno00010
Entry
ppno00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pandoraea pnomenusa RB38
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppno00010  Glycolysis / Gluconeogenesis
ppno00010

Module
ppno_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppno00010]
ppno_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppno00010]
ppno_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppno00010]
Other DBs
GO: 0006096 0006094
Organism
Pandoraea pnomenusa RB38 [GN:ppno]
Gene
DA70_10650  RpiR family transcriptional regulator [KO:K00845] [EC:2.7.1.2]
DA70_02875  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DA70_24075  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
DA70_23035  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DA70_07040  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DA70_19380  gapA; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DA70_23025  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DA70_13905  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
DA70_12220  hypothetical protein [KO:K15634] [EC:5.4.2.11]
DA70_07155  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DA70_23030  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DA70_05205  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DA70_06290  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DA70_20035  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DA70_06285  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
DA70_06275  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
DA70_02270  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DA70_04845  lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
DA70_20165  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DA70_04090  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
DA70_18460  L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
DA70_07795  alcohol dehydrogenase [KO:K22474] [EC:1.1.5.5]
DA70_09905  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
DA70_05010  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
DA70_23920  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
DA70_22410  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DA70_18465  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DA70_11855  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DA70_08655  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
DA70_02195  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
DA70_01485  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
DA70_19205  hypothetical protein [KO:K01785] [EC:5.1.3.3]
DA70_19870  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DA70_15670  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ppno00020  Citrate cycle (TCA cycle)
ppno00030  Pentose phosphate pathway
ppno00500  Starch and sucrose metabolism
ppno00620  Pyruvate metabolism
ppno00640  Propanoate metabolism
ppno00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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