KEGG   PATHWAY: ppog00030
Entry
ppog00030                   Pathway                                
Name
Pentose phosphate pathway - Paenibacillus polygoni
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppog00030  Pentose phosphate pathway
ppog00030

Module
ppog_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppog00030]
ppog_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppog00030]
ppog_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppog00030]
ppog_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppog00030]
ppog_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:ppog00030]
ppog_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:ppog00030]
ppog_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ppog00030]
Other DBs
GO: 0006098
Organism
Paenibacillus polygoni [GN:ppog]
Gene
QPK24_05600  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
QPK24_14430  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
QPK24_20160  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
QPK24_20200  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
QPK24_10005  lactonase family protein [KO:K07404] [EC:3.1.1.31]
QPK24_02220  lactonase family protein [KO:K07404] [EC:3.1.1.31]
QPK24_17470  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
QPK24_20155  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
QPK24_17195  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
QPK24_05590  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
QPK24_22850  transketolase C-terminal domain-containing protein [KO:K00615] [EC:2.2.1.1]
QPK24_22855  transketolase [KO:K00615] [EC:2.2.1.1]
QPK24_14425  fsa; fructose-6-phosphate aldolase [KO:K00616] [EC:2.2.1.2]
QPK24_20150  fsa; fructose-6-phosphate aldolase [KO:K00616] [EC:2.2.1.2]
QPK24_08510  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
QPK24_04480  RpiB/LacA/LacB family sugar-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
QPK24_10015  hxlA; 3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
QPK24_10020  hxlB; 6-phospho-3-hexuloisomerase [KO:K08094] [EC:5.3.1.27]
QPK24_20625  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
QPK24_14700  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
QPK24_01085  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
QPK24_03055  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
QPK24_16575  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
QPK24_21795  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
QPK24_00205  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
QPK24_00790  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
QPK24_18725  bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
QPK24_13005  glucose-1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
QPK24_22505  gntK; gluconokinase [KO:K25031] [EC:2.7.1.12]
QPK24_23525  gntK; gluconokinase [KO:K25031] [EC:2.7.1.12]
QPK24_09710  sugar kinase [KO:K00874] [EC:2.7.1.45]
QPK24_18730  sugar kinase [KO:K00874] [EC:2.7.1.45]
QPK24_13785  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
QPK24_00600  fba; class II fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
QPK24_04495  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
QPK24_13000  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
QPK24_08150  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ppog00010  Glycolysis / Gluconeogenesis
ppog00040  Pentose and glucuronate interconversions
ppog00052  Galactose metabolism
ppog00230  Purine metabolism
ppog00240  Pyrimidine metabolism
ppog00340  Histidine metabolism
ppog00630  Glyoxylate and dicarboxylate metabolism
ppog00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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