KEGG   PATHWAY: ppp00030
Entry
ppp00030                    Pathway                                
Name
Pentose phosphate pathway - Physcomitrium patens (spreading earthmoss)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppp00030  Pentose phosphate pathway
ppp00030

Module
ppp_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppp00030]
ppp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppp00030]
ppp_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppp00030]
ppp_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppp00030]
Other DBs
GO: 0006098
Organism
Physcomitrium patens (spreading earthmoss) [GN:ppp]
Gene
112277588  glucose-6-phosphate isomerase, cytosolic-like isoform X1 [KO:K01810] [EC:5.3.1.9]
112278436  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
112282436  glucose-6-phosphate isomerase, cytosolic-like [KO:K01810] [EC:5.3.1.9]
112283646  glucose-6-phosphate isomerase, cytosolic-like isoform X1 [KO:K01810] [EC:5.3.1.9]
112293715  glucose-6-phosphate isomerase, cytosolic-like isoform X1 [KO:K01810] [EC:5.3.1.9]
112273381  glucose-6-phosphate 1-dehydrogenase, cytoplasmic-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112275726  glucose-6-phosphate 1-dehydrogenase, cytoplasmic-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112276726  glucose-6-phosphate 1-dehydrogenase, cytoplasmic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112279496  glucose-6-phosphate 1-dehydrogenase 1, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112285040  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112288964  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112287639  glucose-6-phosphate 1-dehydrogenase 2, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112291715  glucose-6-phosphate 1-dehydrogenase 2, chloroplastic-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112291764  glucose-6-phosphate 1-dehydrogenase 2, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
112276306  probable 6-phosphogluconolactonase 1 isoform X1 [KO:K01057] [EC:3.1.1.31]
112292866  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
112286472  6-phosphogluconate dehydrogenase, decarboxylating 1-like [KO:K00033] [EC:1.1.1.44 1.1.1.343]
112289741  6-phosphogluconate dehydrogenase, decarboxylating 1-like [KO:K00033] [EC:1.1.1.44 1.1.1.343]
112290604  6-phosphogluconate dehydrogenase, decarboxylating 1-like [KO:K00033] [EC:1.1.1.44 1.1.1.343]
112292009  6-phosphogluconate dehydrogenase, decarboxylating 1-like [KO:K00033] [EC:1.1.1.44 1.1.1.343]
112284833  ribulose-phosphate 3-epimerase, chloroplastic isoform X1 [KO:K01783] [EC:5.1.3.1]
112284909  ribulose-phosphate 3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
112288549  ribulose-phosphate 3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
112295085  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
112282252  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
112287251  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
112286925  transketolase, chloroplastic-like isoform X1 [KO:K00615] [EC:2.2.1.1]
112287496  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
112277892  uncharacterized protein LOC112277892 [KO:K00616] [EC:2.2.1.2]
112276454  uncharacterized protein LOC112276454 [KO:K00616] [EC:2.2.1.2]
112292756  uncharacterized protein LOC112292756 [KO:K00616] [EC:2.2.1.2]
112282999  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
112293051  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
112293097  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
112282766  uncharacterized protein LOC112282766 isoform X1 [KO:K00852] [EC:2.7.1.15]
112284086  uncharacterized protein LOC112284086 [KO:K00852] [EC:2.7.1.15]
112277516  probable phosphoglucomutase, cytoplasmic 1 isoform X1 [KO:K01835] [EC:5.4.2.2]
112286951  phosphoglucomutase, chloroplastic-like [KO:K01835] [EC:5.4.2.2]
112293410  phosphoglucomutase, cytoplasmic 2-like isoform X1 [KO:K01835] [EC:5.4.2.2]
112292642  phosphoglucomutase, chloroplastic-like [KO:K01835] [EC:5.4.2.2]
112272974  ribose-phosphate pyrophosphokinase 1 isoform X1 [KO:K00948] [EC:2.7.6.1]
112276340  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
112285280  ribose-phosphate pyrophosphokinase 1-like isoform X1 [KO:K00948] [EC:2.7.6.1]
112285049  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
112288982  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
112272971  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
112276110  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
112276689  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
112276475  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform X1 [KO:K00131] [EC:1.2.1.9]
112294311  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform X1 [KO:K00131] [EC:1.2.1.9]
112278083  uncharacterized protein LOC112278083 isoform X1 [KO:K01053] [EC:3.1.1.17]
112280515  uncharacterized protein LOC112280515 isoform X1 [KO:K01053] [EC:3.1.1.17]
112282284  uncharacterized protein LOC112282284 [KO:K01053] [EC:3.1.1.17]
112281902  uncharacterized protein LOC112281902 [KO:K01053] [EC:3.1.1.17]
112284276  regucalcin-like [KO:K01053] [EC:3.1.1.17]
112282037  gluconokinase-like [KO:K00851] [EC:2.7.1.12]
112274252  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
112277134  fructose-bisphosphate aldolase, cytoplasmic isozyme-like [KO:K01623] [EC:4.1.2.13]
112278816  fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like isoform X1 [KO:K01623] [EC:4.1.2.13]
112279073  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
112283980  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
112283970  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
112286803  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
112288223  fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like isoform X1 [KO:K01623] [EC:4.1.2.13]
112292683  fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like [KO:K01623] [EC:4.1.2.13]
112295340  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
112272655  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
112274955  uncharacterized protein LOC112274955 [KO:K03841] [EC:3.1.3.11]
112276369  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
112279272  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
112285065  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
112290176  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
112295361  uncharacterized protein LOC112295361 [KO:K03841] [EC:3.1.3.11]
112273596  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [KO:K00850] [EC:2.7.1.11]
112283154  ATP-dependent 6-phosphofructokinase 6-like isoform X1 [KO:K00850] [EC:2.7.1.11]
112286176  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [KO:K00850] [EC:2.7.1.11]
112286560  ATP-dependent 6-phosphofructokinase 6-like isoform X1 [KO:K00850] [EC:2.7.1.11]
112286452  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like isoform X1 [KO:K00850] [EC:2.7.1.11]
112288805  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like isoform X1 [KO:K00850] [EC:2.7.1.11]
112291863  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
112293526  ATP-dependent 6-phosphofructokinase 6-like isoform X1 [KO:K00850] [EC:2.7.1.11]
112274296  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [KO:K00895] [EC:2.7.1.90]
112281835  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
112292326  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
112295193  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isoform X1 [KO:K00895] [EC:2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ppp00010  Glycolysis / Gluconeogenesis
ppp00040  Pentose and glucuronate interconversions
ppp00052  Galactose metabolism
ppp00230  Purine metabolism
ppp00240  Pyrimidine metabolism
ppp00340  Histidine metabolism
ppp00630  Glyoxylate and dicarboxylate metabolism
ppp00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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