KEGG   PATHWAY: ppud00010
Entry
ppud00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas putida DLL-E4
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppud00010  Glycolysis / Gluconeogenesis
ppud00010

Module
ppud_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppud00010]
ppud_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppud00010]
ppud_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppud00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas putida DLL-E4 [GN:ppud]
Gene
DW66_0999  glucokinase [KO:K00845] [EC:2.7.1.2]
DW66_1324  glucokinase [KO:K00845] [EC:2.7.1.2]
DW66_4938  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DW66_5277  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
DW66_5192  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DW66_4953  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DW66_0997  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DW66_2007  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DW66_1322  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DW66_5195  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DW66_5293  phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
DW66_1491  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DW66_1157  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DW66_4133  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DW66_4681  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DW66_1937  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DW66_0346  pyruvate dehydrogenase subunit E1 [KO:K00163] [EC:1.2.4.1]
DW66_0568  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
DW66_0345  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
DW66_4031  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
DW66_4241  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DW66_5788  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
DW66_1495  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DW66_1161  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DW66_3750  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
DW66_3719  alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
DW66_4707  glucose dehydrogenase [KO:K00114] [EC:1.1.2.8]
DW66_2478  quinoprotein ethanol dehydrogenase [KO:K00114] [EC:1.1.2.8]
DW66_2483  quinoprotein ethanol dehydrogenase [KO:K00114] [EC:1.1.2.8]
DW66_3117  gluconate 2-dehydrogenase [KO:K22474] [EC:1.1.5.5]
DW66_3382  gluconate 2-dehydrogenase [KO:K22474] [EC:1.1.5.5]
DW66_3459  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
DW66_3578  PnpD [KO:K00128] [EC:1.2.1.3]
DW66_3595  gamma-hydroxymuconic semialdehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
DW66_0555  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DW66_2484  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DW66_4939  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
DW66_4268  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DW66_2073  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
DW66_3463  acyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
DW66_3344  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
DW66_5708  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DW66_5750  aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
DW66_3179  aldehyde dehydrogenase [KO:K00131] [EC:1.2.1.9]
DW66_0257  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ppud00020  Citrate cycle (TCA cycle)
ppud00030  Pentose phosphate pathway
ppud00500  Starch and sucrose metabolism
ppud00620  Pyruvate metabolism
ppud00640  Propanoate metabolism
ppud00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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