KEGG   PATHWAY: psee00630
Entry
psee00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudonocardia sp. EC080625-04
Class
Metabolism; Carbohydrate metabolism
Pathway map
psee00630  Glyoxylate and dicarboxylate metabolism
psee00630

Module
psee_M00012  Glyoxylate cycle [PATH:psee00630]
psee_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:psee00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudonocardia sp. EC080625-04 [GN:psee]
Gene
FRP1_00520  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
FRP1_07895  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
FRP1_07030  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
FRP1_21195  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
FRP1_24405  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
FRP1_19070  malate synthase [KO:K01638] [EC:2.3.3.9]
FRP1_15150  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
FRP1_00525  citrate synthase [KO:K01647] [EC:2.3.3.1]
FRP1_00550  citrate synthase [KO:K01647] [EC:2.3.3.1]
FRP1_11335  hypothetical protein [KO:K01647] [EC:2.3.3.1]
FRP1_19965  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
FRP1_23495  hypothetical protein [KO:K01647] [EC:2.3.3.1]
FRP1_23510  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
FRP1_09695  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
FRP1_03495  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FRP1_25745  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FRP1_27670  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FRP1_23375  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FRP1_22455  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FRP1_27890  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FRP1_19985  3-oxoacyl-ACP synthase [KO:K00023] [EC:1.1.1.36]
FRP1_21170  dehydratase [KO:K17865] [EC:4.2.1.55]
FRP1_03490  glyoxalase [KO:K05606] [EC:5.1.99.1]
FRP1_03360  protein meaA [KO:K14447] [EC:5.4.99.63]
FRP1_02470  acetyl-COA carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
FRP1_21155  acetyl-COA carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
FRP1_02530  methylmalonyl-CoA carboxyltransferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
FRP1_02525  acetyl-CoA carboxylase [KO:K27095]
FRP1_10770  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
FRP1_10775  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
FRP1_19075  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
FRP1_19330  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
FRP1_19080  dehydrogenase [KO:K11472] [EC:1.1.99.14]
FRP1_19085  glycolate oxidase [KO:K11473] [EC:1.1.99.14]
FRP1_24630  catalase [KO:K03781] [EC:1.11.1.6]
FRP1_07135  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
FRP1_14700  hypothetical protein [KO:K01091] [EC:3.1.3.18]
FRP1_03415  rbcL; ribulose 1,5-bisphosphate carboxylase [KO:K01601] [EC:4.1.1.39]
FRP1_03410  ribulose 1,5-bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
FRP1_06960  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
FRP1_12430  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FRP1_15765  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FRP1_15815  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FRP1_03280  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FRP1_29015  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FRP1_07315  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
FRP1_07285  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
FRP1_12215  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FRP1_10960  hypothetical protein [KO:K02437]
FRP1_09790  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
FRP1_09800  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
FRP1_09795  tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
FRP1_09785  glycerate kinase [KO:K00865] [EC:2.7.1.165]
FRP1_23165  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
FRP1_09835  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FRP1_10530  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FRP1_03075  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
FRP1_16660  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
FRP1_29280  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
FRP1_05315  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
FRP1_05320  dehydrogenase [KO:K00123] [EC:1.17.1.9]
FRP1_05310  ferredoxin [KO:K00124]
FRP1_23610  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
FRP1_20270  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
FRP1_14300  formamidase [KO:K01455] [EC:3.5.1.49]
FRP1_26210  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
psee00010  Glycolysis / Gluconeogenesis
psee00020  Citrate cycle (TCA cycle)
psee00030  Pentose phosphate pathway
psee00053  Ascorbate and aldarate metabolism
psee00071  Fatty acid degradation
psee00230  Purine metabolism
psee00250  Alanine, aspartate and glutamate metabolism
psee00260  Glycine, serine and threonine metabolism
psee00620  Pyruvate metabolism
psee00710  Carbon fixation by Calvin cycle
psee00750  Vitamin B6 metabolism
psee00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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