KEGG   PATHWAY: psej00630
Entry
psej00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas sediminis
Class
Metabolism; Carbohydrate metabolism
Pathway map
psej00630  Glyoxylate and dicarboxylate metabolism
psej00630

Module
psej_M00621  Glycine cleavage system [PATH:psej00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas sediminis [GN:psej]
Gene
HNQ25_13555  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HNQ25_06730  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HNQ25_09135  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HNQ25_00580  malate synthase G [KO:K01638] [EC:2.3.3.9]
HNQ25_04180  malate synthase G [KO:K01638] [EC:2.3.3.9]
HNQ25_12205  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HNQ25_11050  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HNQ25_14040  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
HNQ25_05530  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HNQ25_06415  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HNQ25_11880  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HNQ25_14105  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HNQ25_18785  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HNQ25_20520  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HNQ25_16940  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
HNQ25_00560  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
HNQ25_00565  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
HNQ25_00570  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HNQ25_12880  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
HNQ25_02940  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HNQ25_06405  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HNQ25_02320  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HNQ25_04670  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HNQ25_16330  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
HNQ25_02045  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_02790  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_03960  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HNQ25_10315  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_14310  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_20950  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_22660  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_22665  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HNQ25_03995  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HNQ25_17810  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HNQ25_20430  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HNQ25_17805  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HNQ25_17815  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HNQ25_22725  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HNQ25_12240  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HNQ25_18965  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HNQ25_17800  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HNQ25_22720  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HNQ25_10785  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
HNQ25_08700  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
HNQ25_10780  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
HNQ25_10775  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
HNQ25_17255  glycerate kinase [KO:K00865] [EC:2.7.1.165]
HNQ25_10770  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HNQ25_09010  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HNQ25_04020  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HNQ25_08080  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HNQ25_20215  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
psej00010  Glycolysis / Gluconeogenesis
psej00020  Citrate cycle (TCA cycle)
psej00030  Pentose phosphate pathway
psej00053  Ascorbate and aldarate metabolism
psej00071  Fatty acid degradation
psej00230  Purine metabolism
psej00250  Alanine, aspartate and glutamate metabolism
psej00260  Glycine, serine and threonine metabolism
psej00620  Pyruvate metabolism
psej00710  Carbon fixation by Calvin cycle
psej00750  Vitamin B6 metabolism
psej00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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