KEGG   PATHWAY: pthi00010
Entry
pthi00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Paenibacillus thiaminolyticus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pthi00010  Glycolysis / Gluconeogenesis
pthi00010

Module
pthi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pthi00010]
pthi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pthi00010]
pthi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pthi00010]
pthi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pthi00010]
Other DBs
GO: 0006096 0006094
Organism
Paenibacillus thiaminolyticus [GN:pthi]
Gene
NDS46_01020  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
NDS46_25375  ROK family protein [KO:K25026] [EC:2.7.1.2]
NDS46_24070  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NDS46_20985  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
NDS46_07125  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
NDS46_08750  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
NDS46_08490  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
NDS46_00770  fba; class II fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
NDS46_01220  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
NDS46_01210  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NDS46_22410  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
NDS46_01215  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NDS46_25590  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
NDS46_01225  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
NDS46_01230  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
NDS46_21435  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NDS46_22420  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
NDS46_17035  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
NDS46_17030  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
NDS46_04980  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
NDS46_17025  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
NDS46_04985  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NDS46_17020  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NDS46_18285  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NDS46_08315  thiamine pyrophosphate-dependent enzyme [KO:K00169] [EC:1.2.7.1]
NDS46_08310  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
NDS46_11110  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
NDS46_11115  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
NDS46_11190  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
NDS46_11855  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NDS46_18800  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
NDS46_06965  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NDS46_13855  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
NDS46_09800  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NDS46_06415  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
NDS46_02260  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
NDS46_08520  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
NDS46_21205  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
NDS46_20435  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
NDS46_03320  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
NDS46_03340  ptsG; glucose-specific PTS transporter subunit IIBC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pthi00020  Citrate cycle (TCA cycle)
pthi00030  Pentose phosphate pathway
pthi00500  Starch and sucrose metabolism
pthi00620  Pyruvate metabolism
pthi00640  Propanoate metabolism
pthi00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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