KEGG   PATHWAY: raq00010
Entry
raq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rahnella aquatilis CIP 78.65 = ATCC 33071
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
raq00010  Glycolysis / Gluconeogenesis
raq00010

Module
raq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:raq00010]
raq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:raq00010]
raq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:raq00010]
raq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:raq00010]
Other DBs
GO: 0006096 0006094
Organism
Rahnella aquatilis CIP 78.65 = ATCC 33071 [GN:raq]
Gene
Rahaq2_1208  glucokinase [KO:K00845] [EC:2.7.1.2]
Rahaq2_4202  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Rahaq2_4444  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Rahaq2_0487  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Rahaq2_4437  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Rahaq2_4960  DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme [KO:K11645] [EC:4.1.2.13]
Rahaq2_3598  fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Rahaq2_4442  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Rahaq2_2182  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Rahaq2_2332  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Rahaq2_3599  3-phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Rahaq2_3154  phosphoglycerate mutase, BPG-dependent, family 1 [KO:K01834] [EC:5.4.2.11]
Rahaq2_3901  fructose-2,6-bisphosphatase [KO:K15634] [EC:5.4.2.11]
Rahaq2_0617  fructose-2,6-bisphosphatase [KO:K15634] [EC:5.4.2.11]
Rahaq2_4454  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Rahaq2_0683  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Rahaq2_2141  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Rahaq2_2822  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Rahaq2_2836  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Rahaq2_3801  pyruvate dehydrogenase E1 component, homodimeric type [KO:K00163] [EC:1.2.4.1]
Rahaq2_3800  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form [KO:K00627] [EC:2.3.1.12]
Rahaq2_3799  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Rahaq2_5091  pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Rahaq2_2237  pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Rahaq2_1468  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Rahaq2_2033  alcohol dehydrogenase, class IV [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Rahaq2_2894  Zn-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
Rahaq2_0663  Zn-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
Rahaq2_2104  Zn-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
Rahaq2_2637  Zn-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
Rahaq2_4653  cytochrome c, mono- and diheme variants family [KO:K22474] [EC:1.1.5.5]
Rahaq2_0055  NAD-dependent aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
Rahaq2_0411  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Rahaq2_3152  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
Rahaq2_3498  Histidine acid phosphatase [KO:K01085] [EC:3.1.3.10]
Rahaq2_4501  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED [KO:K20866] [EC:3.1.3.10]
Rahaq2_3203  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Rahaq2_2181  aldose 1-epimerase-like enzyme [KO:K01792] [EC:5.1.3.15]
Rahaq2_0276  ATP-dependent phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Rahaq2_4645  family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
Rahaq2_0870  beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [KO:K01223] [EC:3.2.1.86]
Rahaq2_1804  beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [KO:K01223] [EC:3.2.1.86]
Rahaq2_3993  beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [KO:K01223] [EC:3.2.1.86]
Rahaq2_2227  beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [KO:K01223] [EC:3.2.1.86]
Rahaq2_0217  beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [KO:K01223] [EC:3.2.1.86]
Rahaq2_1174  PTS system, glucose subfamily, IIA component [KO:K02777] [EC:2.7.1.-]
Rahaq2_2969  PTS system, glucose-specific IIBC component [KO:K02779] [EC:2.7.1.199]
Rahaq2_0859  PTS system, glucose-like IIB component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Rahaq2_2292  PTS system, maltose and glucose-specific subfamily, IIC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Rahaq2_2226  glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
raq00020  Citrate cycle (TCA cycle)
raq00030  Pentose phosphate pathway
raq00500  Starch and sucrose metabolism
raq00620  Pyruvate metabolism
raq00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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