KEGG   PATHWAY: rbm00010
Entry
rbm00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rhizobiales bacterium NRL2
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rbm00010  Glycolysis / Gluconeogenesis
rbm00010

Module
rbm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rbm00010]
rbm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rbm00010]
rbm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rbm00010]
Other DBs
GO: 0006096 0006094
Organism
Rhizobiales bacterium NRL2 [GN:rbm]
Gene
TEF_13685  hypothetical protein [KO:K01810] [EC:5.3.1.9]
TEF_12355  fructose-1,6-bisphosphatase, class II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
TEF_05660  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
TEF_11275  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
TEF_05670  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
TEF_02830  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
TEF_05665  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
TEF_03405  phosphoglycerate mutase (2,3-diphosphoglycerate-independent) [KO:K15633] [EC:5.4.2.12]
TEF_11295  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
TEF_18150  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
TEF_03435  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
TEF_09080  transketolase [KO:K00163] [EC:1.2.4.1]
TEF_09650  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
TEF_13455  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
TEF_13460  2-oxoisovalerate dehydrogenase [KO:K00162] [EC:1.2.4.1]
TEF_09655  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
TEF_13465  hypothetical protein [KO:K00627] [EC:2.3.1.12]
TEF_09660  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
TEF_09665  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TEF_19580  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TEF_16165  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
TEF_16160  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
TEF_06635  zinc-binding dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
TEF_01790  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
TEF_00540  hypothetical protein [KO:K13953] [EC:1.1.1.1]
TEF_08170  zinc-binding dehydrogenase [KO:K13953] [EC:1.1.1.1]
TEF_15150  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
TEF_07425  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
TEF_09515  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
TEF_01320  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
TEF_01590  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
TEF_20790  hypothetical protein [KO:K24012] [EC:6.2.1.13]
TEF_08140  hypothetical protein [KO:K24012] [EC:6.2.1.13]
TEF_04300  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rbm00020  Citrate cycle (TCA cycle)
rbm00030  Pentose phosphate pathway
rbm00500  Starch and sucrose metabolism
rbm00620  Pyruvate metabolism
rbm00640  Propanoate metabolism
rbm00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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