KEGG   PATHWAY: rgi00240
Entry
rgi00240                    Pathway                                
Name
Pyrimidine metabolism - Roseomonas gilardii
Class
Metabolism; Nucleotide metabolism
Pathway map
rgi00240  Pyrimidine metabolism
rgi00240

Module
rgi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rgi00240]
rgi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rgi00240]
rgi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rgi00240]
rgi_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:rgi00240]
Other DBs
GO: 0006220 0006213
Organism
Roseomonas gilardii [GN:rgi]
Gene
RGI145_13605  carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
RGI145_13590  carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
RGI145_07825  aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
RGI145_11690  dihydroorotase [KO:K01465] [EC:3.5.2.3]
RGI145_15995  dihydroorotase [KO:K01465] [EC:3.5.2.3]
RGI145_07820  dihydroorotase [KO:K01465] [EC:3.5.2.3]
RGI145_04935  dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
RGI145_10105  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
RGI145_00360  orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
RGI145_10310  UMP kinase [KO:K09903] [EC:2.7.4.22]
RGI145_04620  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
RGI145_08420  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
RGI145_18600  septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
RGI145_12215  septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
RGI145_09030  CTP synthase [KO:K01937] [EC:6.3.4.2]
RGI145_19360  cytidylate kinase [KO:K00945] [EC:2.7.4.25]
RGI145_18445  bifunctional metallophosphatase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
RGI145_07395  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
RGI145_02990  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
RGI145_10795  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
RGI145_03015  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
RGI145_12235  dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
RGI145_09345  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
RGI145_05445  hypothetical protein [KO:K00525] [EC:1.17.4.1]
RGI145_09340  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
RGI145_08445  dTMP kinase [KO:K00943] [EC:2.7.4.9]
RGI145_12665  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
RGI145_23900  hypothetical protein [KO:K00560] [EC:2.1.1.45]
RGI145_19470  thymidylate synthase, flavin-dependent [KO:K03465] [EC:2.1.1.148]
RGI145_12825  FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
RGI145_18995  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
RGI145_18310  Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RGI145_06325  Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RGI145_08710  Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RGI145_13000  Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RGI145_06135  pyrimidine utilization protein A [KO:K09018] [EC:1.14.99.46]
RGI145_14655  pyrimidine utilization protein A [KO:K09018] [EC:1.14.99.46]
RGI145_04490  4-hydroxyphenylacetate 3-monooxygenase [KO:K09024] [EC:1.5.1.-]
RGI145_17075  hypothetical protein [KO:K09020] [EC:3.5.1.110]
RGI145_17080  hypothetical protein [KO:K09020] [EC:3.5.1.110]
RGI145_16485  pyrimidine utilization protein C [KO:K09021]
RGI145_16480  pyrimidine utilization protein D [KO:K09023] [EC:3.5.1.-]
RGI145_12610  NAD(P)-dependent oxidoreductase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
RGI145_01275  malonic semialdehyde reductase [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
rgi00030  Pentose phosphate pathway
rgi00220  Arginine biosynthesis
rgi00250  Alanine, aspartate and glutamate metabolism
rgi00280  Valine, leucine and isoleucine degradation
rgi00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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