KEGG   PATHWAY: rgo00630
Entry
rgo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhodococcus globerulus
Class
Metabolism; Carbohydrate metabolism
Pathway map
rgo00630  Glyoxylate and dicarboxylate metabolism
rgo00630

Module
rgo_M00012  Glyoxylate cycle [PATH:rgo00630]
rgo_M00621  Glycine cleavage system [PATH:rgo00630]
rgo_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rgo00630]
Other DBs
GO: 0046487 0043648
Organism
Rhodococcus globerulus [GN:rgo]
Gene
KYT97_10755  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KYT97_22065  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KYT97_00405  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
KYT97_04795  malate synthase G [KO:K01638] [EC:2.3.3.9]
KYT97_02470  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
KYT97_30010  citrate synthase [KO:K01647] [EC:2.3.3.1]
KYT97_30030  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
KYT97_30540  bifunctional 2-methylcitrate synthase/citrate synthase [KO:K01647] [EC:2.3.3.1]
KYT97_03575  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
KYT97_13385  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_13935  thiolase family protein [KO:K00626] [EC:2.3.1.9]
KYT97_14455  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_15565  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KYT97_15855  thiolase family protein [KO:K00626] [EC:2.3.1.9]
KYT97_15980  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_16090  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_17440  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_18820  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_20645  thiolase family protein [KO:K00626] [EC:2.3.1.9]
KYT97_21560  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_21655  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KYT97_23475  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_24325  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KYT97_24350  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
KYT97_26650  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_28550  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_28940  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_30345  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KYT97_02280  thiolase family protein [KO:K00626] [EC:2.3.1.9]
KYT97_26655  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
KYT97_23675  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
KYT97_07950  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
KYT97_07905  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
KYT97_07910  acyl-CoA carboxylase subunit epsilon [KO:K27095]
KYT97_25495  acyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
KYT97_03700  mutA; methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
KYT97_03705  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KYT97_14325  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
KYT97_14330  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
KYT97_19615  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
KYT97_27645  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
KYT97_01515  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
KYT97_12355  catalase [KO:K03781] [EC:1.11.1.6]
KYT97_12450  catalase [KO:K03781] [EC:1.11.1.6]
KYT97_21850  catalase [KO:K03781] [EC:1.11.1.6]
KYT97_02520  catalase [KO:K03781] [EC:1.11.1.6]
KYT97_25405  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
KYT97_15605  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
KYT97_17295  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KYT97_25335  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
KYT97_26400  glutamine synthetase III [KO:K01915] [EC:6.3.1.2]
KYT97_06805  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KYT97_28385  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KYT97_04810  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
KYT97_06760  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KYT97_10890  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KYT97_04835  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KYT97_06730  glycerate kinase [KO:K00865] [EC:2.7.1.165]
KYT97_27780  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
KYT97_17345  cyclase family protein [KO:K07130] [EC:3.5.1.9]
KYT97_10660  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
KYT97_10765  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rgo00010  Glycolysis / Gluconeogenesis
rgo00020  Citrate cycle (TCA cycle)
rgo00030  Pentose phosphate pathway
rgo00053  Ascorbate and aldarate metabolism
rgo00071  Fatty acid degradation
rgo00230  Purine metabolism
rgo00250  Alanine, aspartate and glutamate metabolism
rgo00260  Glycine, serine and threonine metabolism
rgo00620  Pyruvate metabolism
rgo00710  Carbon fixation by Calvin cycle
rgo00750  Vitamin B6 metabolism
rgo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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