KEGG   PATHWAY: rhn00010
Entry
rhn00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rhizobium sp. N1341
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rhn00010  Glycolysis / Gluconeogenesis
rhn00010

Module
rhn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rhn00010]
rhn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rhn00010]
Other DBs
GO: 0006096 0006094
Organism
Rhizobium sp. N1341 [GN:rhn]
Gene
AMJ98_CH00178  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
AMJ98_CH00493  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AMJ98_CH03029  pyrophosphate--fructose-6-phosphate 1-phosphotransferase protein [KO:K00895] [EC:2.7.1.90]
AMJ98_CH03722  fructose-bisphosphate aldolase protein [KO:K01623] [EC:4.1.2.13]
AMJ98_CH02238  tpiA-1; triosephosphate isomerase 1 [KO:K01803] [EC:5.3.1.1]
AMJ98_CH03717  gap; glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
AMJ98_CH03721  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AMJ98_CH00175  gpmA-1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
AMJ98_CH02410  phosphoglycerate mutase family protein [KO:K01834] [EC:5.4.2.11]
AMJ98_PC00160  gpmA-2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
AMJ98_CH01994  eno; enolase [KO:K01689] [EC:4.2.1.11]
AMJ98_CH03766  pyruvate kinase protein [KO:K00873] [EC:2.7.1.40]
AMJ98_CH01020  ppdK; pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
AMJ98_CH01996  pdhA; pyruvate dehydrogenase E1 component alpha subunit [KO:K00161] [EC:1.2.4.1]
AMJ98_CH01997  pdhB; pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
AMJ98_CH01998  pdhC; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
AMJ98_PB00091  lpdV; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMJ98_CH02001  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMJ98_CH04110  dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
AMJ98_PE00479  adhI-2; bifunctional alcohol dehydrogenase class 3/S-(hydroxymethyl)glutathione dehydrogenase 2 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AMJ98_CH02280  adhI-1; bifunctional alcohol dehydrogenase class 3/S-(hydroxymethyl)glutathione dehydrogenase 1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AMJ98_CH00631  adhA-1; alcohol dehydrogenase 1 [KO:K13953] [EC:1.1.1.1]
AMJ98_PC00041  alcohol dehydrogenase protein [KO:K13953] [EC:1.1.1.1]
AMJ98_CH02920  adhC; alcohol dehydrogenase (NADP+) [KO:K13979] [EC:1.1.1.2]
AMJ98_PE00437  aldehyde dehydrogenase (NAD(+)) protein [KO:K00128] [EC:1.2.1.3]
AMJ98_PE00461  aldehyde dehydrogenase (NAD(+)) protein [KO:K00128] [EC:1.2.1.3]
AMJ98_CH03959  aldehyde dehydrogenase (NAD(+)) protein [KO:K00138] [EC:1.2.1.-]
AMJ98_CH04346  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMJ98_CH03995  AMP-dependent synthetase/ligase protein [KO:K01895] [EC:6.2.1.1]
AMJ98_CH04262  galM; aldose-1-epimerase [KO:K01785] [EC:5.1.3.3]
AMJ98_PE00586  aldose-1-epimerase protein [KO:K01785] [EC:5.1.3.3]
AMJ98_CH03928  aldose-1-epimerase protein [KO:K01785] [EC:5.1.3.3]
AMJ98_CH03823  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AMJ98_CH00037  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rhn00020  Citrate cycle (TCA cycle)
rhn00030  Pentose phosphate pathway
rhn00500  Starch and sucrose metabolism
rhn00620  Pyruvate metabolism
rhn00640  Propanoate metabolism
rhn00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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