KEGG   PATHWAY: rmf00630
Entry
rmf00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rossellomorea marisflavi
Class
Metabolism; Carbohydrate metabolism
Pathway map
rmf00630  Glyoxylate and dicarboxylate metabolism
rmf00630

Module
rmf_M00012  Glyoxylate cycle [PATH:rmf00630]
rmf_M00621  Glycine cleavage system [PATH:rmf00630]
Other DBs
GO: 0046487 0043648
Organism
Rossellomorea marisflavi [GN:rmf]
Gene
D5E69_02125  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
D5E69_16445  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
D5E69_16525  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
D5E69_02120  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
D5E69_16265  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
D5E69_11335  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
D5E69_16275  citZ; citrate synthase [KO:K01659] [EC:2.3.3.5]
D5E69_11660  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
D5E69_13905  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D5E69_21155  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
D5E69_22090  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D5E69_16260  enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
D5E69_14025  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
D5E69_14070  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
D5E69_14075  hypothetical protein [KO:K01847] [EC:5.4.99.2]
D5E69_05125  methylaspartate mutase subunit E [KO:K19268] [EC:5.4.99.1]
D5E69_05120  methylaspartate mutase subunit S [KO:K01846] [EC:5.4.99.1]
D5E69_07320  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
D5E69_07055  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
D5E69_07050  4Fe-4S dicluster domain-containing protein [KO:K11473] [EC:1.1.99.14]
D5E69_07325  4Fe-4S dicluster domain-containing protein [KO:K11473] [EC:1.1.99.14]
D5E69_07290  catalase [KO:K03781] [EC:1.11.1.6]
D5E69_17395  catalase [KO:K03781] [EC:1.11.1.6]
D5E69_17640  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
D5E69_01080  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
D5E69_10725  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
D5E69_20870  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K00600] [EC:2.1.2.1]
D5E69_14570  aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
D5E69_14565  aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
D5E69_14575  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
D5E69_02605  FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
D5E69_09340  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D5E69_17805  gcvH; glycine cleavage system protein GcvH [KO:K02437]
D5E69_19910  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
D5E69_18265  glycerate kinase [KO:K00865] [EC:2.7.1.165]
D5E69_02935  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
D5E69_18170  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D5E69_19935  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D5E69_01250  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
D5E69_11275  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
D5E69_14005  cyclase family protein [KO:K07130] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rmf00010  Glycolysis / Gluconeogenesis
rmf00020  Citrate cycle (TCA cycle)
rmf00030  Pentose phosphate pathway
rmf00071  Fatty acid degradation
rmf00230  Purine metabolism
rmf00250  Alanine, aspartate and glutamate metabolism
rmf00260  Glycine, serine and threonine metabolism
rmf00620  Pyruvate metabolism
rmf00710  Carbon fixation by Calvin cycle
rmf00750  Vitamin B6 metabolism
rmf00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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