KEGG   PATHWAY: rpln00630
Entry
rpln00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Raoultella planticola
Class
Metabolism; Carbohydrate metabolism
Pathway map
rpln00630  Glyoxylate and dicarboxylate metabolism
rpln00630

Module
rpln_M00621  Glycine cleavage system [PATH:rpln00630]
Other DBs
GO: 0046487 0043648
Organism
Raoultella planticola [GN:rpln]
Gene
B1209_25560  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
B1209_25175  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
B1209_02460  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B1209_19065  type II citrate synthase [KO:K01647] [EC:2.3.3.1]
B1209_20420  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
B1209_15580  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
B1209_22555  aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
B1209_11280  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B1209_04565  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B1209_15830  catalase HPII [KO:K03781] [EC:1.11.1.6]
B1209_05785  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B1209_16970  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B1209_00935  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
B1209_01885  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
B1209_26695  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B1209_06190  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B1209_04075  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
B1209_04065  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
B1209_22575  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B1209_04070  glycine cleavage system protein H [KO:K02437]
B1209_02955  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
B1209_05000  glycerate kinase [KO:K00865] [EC:2.7.1.165]
B1209_02960  glycerate 2-kinase [KO:K00865] [EC:2.7.1.165]
B1209_08640  glycerate kinase [KO:K00865] [EC:2.7.1.165]
B1209_14525  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
B1209_04885  lactaldehyde reductase [KO:K00048] [EC:1.1.1.77]
B1209_17480  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
B1209_09385  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B1209_26625  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
B1209_26630  formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
B1209_26635  formate dehydrogenase subunit beta [KO:K00124]
B1209_26640  formate dehydrogenase cytochrome b556 subunit [KO:K00127]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rpln00010  Glycolysis / Gluconeogenesis
rpln00020  Citrate cycle (TCA cycle)
rpln00030  Pentose phosphate pathway
rpln00053  Ascorbate and aldarate metabolism
rpln00071  Fatty acid degradation
rpln00230  Purine metabolism
rpln00250  Alanine, aspartate and glutamate metabolism
rpln00260  Glycine, serine and threonine metabolism
rpln00620  Pyruvate metabolism
rpln00710  Carbon fixation by Calvin cycle
rpln00750  Vitamin B6 metabolism
rpln00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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