KEGG   PATHWAY: rpop00010
Entry
rpop00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Roseibium porphyridii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rpop00010  Glycolysis / Gluconeogenesis
rpop00010

Module
rpop_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rpop00010]
rpop_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rpop00010]
rpop_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rpop00010]
Other DBs
GO: 0006096 0006094
Organism
Roseibium porphyridii [GN:rpop]
Gene
K1718_24575  ROK family protein [KO:K00845] [EC:2.7.1.2]
K1718_00520  glucokinase [KO:K00845] [EC:2.7.1.2]
K1718_10725  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K1718_11375  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
K1718_16860  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
K1718_05150  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
K1718_06820  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
K1718_14695  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
K1718_04545  glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein [KO:K00134] [EC:1.2.1.12]
K1718_05170  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
K1718_05160  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
K1718_26890  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
K1718_06160  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
K1718_15380  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
K1718_07195  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
K1718_04940  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
K1718_12740  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
K1718_19210  1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein [KO:K00163] [EC:1.2.4.1]
K1718_14800  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
K1718_14805  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
K1718_14810  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
K1718_14815  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K1718_26610  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K1718_16225  porA; pyruvate ferredoxin oxidoreductase [KO:K00169] [EC:1.2.7.1]
K1718_16220  thiamine pyrophosphate-dependent enzyme [KO:K00170] [EC:1.2.7.1]
K1718_16230  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
K1718_16805  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
K1718_07695  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
K1718_01705  zinc-dependent alcohol dehydrogenase family protein [KO:K00001] [EC:1.1.1.1]
K1718_19365  PQQ-dependent methanol/ethanol family dehydrogenase [KO:K00114] [EC:1.1.2.8]
K1718_21895  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K1718_11675  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K1718_19265  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K1718_02405  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K1718_03460  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
K1718_04085  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
K1718_24475  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
K1718_00515  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
K1718_22795  HAD-IA family hydrolase [KO:K20866] [EC:3.1.3.10]
K1718_07005  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
K1718_24480  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
K1718_26485  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rpop00020  Citrate cycle (TCA cycle)
rpop00030  Pentose phosphate pathway
rpop00500  Starch and sucrose metabolism
rpop00620  Pyruvate metabolism
rpop00640  Propanoate metabolism
rpop00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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