KEGG   PATHWAY: rros00630
Entry
rros00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobium rosettiformans
Class
Metabolism; Carbohydrate metabolism
Pathway map
rros00630  Glyoxylate and dicarboxylate metabolism
rros00630

Module
rros_M00012  Glyoxylate cycle [PATH:rros00630]
rros_M00621  Glycine cleavage system [PATH:rros00630]
rros_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rros00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobium rosettiformans [GN:rros]
Gene
D4A92_10500  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
D4A92_04195  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
D4A92_05925  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
D4A92_06235  malate synthase G [KO:K01638] [EC:2.3.3.9]
D4A92_04775  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
D4A92_03090  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
D4A92_17110  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
D4A92_05790  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
D4A92_03140  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D4A92_05040  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
D4A92_09180  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
D4A92_05035  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
D4A92_15210  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
D4A92_01955  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
D4A92_01925  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
D4A92_09965  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D4A92_01970  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
D4A92_11335  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
D4A92_11340  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
D4A92_11350  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
D4A92_10930  catalase [KO:K03781] [EC:1.11.1.6]
D4A92_07240  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
D4A92_07385  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
D4A92_01900  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
D4A92_11550  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
D4A92_16505  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
D4A92_18605  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
D4A92_10465  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
D4A92_10650  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
D4A92_13945  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
D4A92_17460  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
D4A92_19480  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
D4A92_21090  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
D4A92_14815  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
D4A92_16460  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
D4A92_16470  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
D4A92_03170  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D4A92_04735  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D4A92_17175  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D4A92_16465  gcvH; glycine cleavage system protein GcvH [KO:K02437]
D4A92_03745  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
D4A92_03980  glycerate kinase [KO:K11529] [EC:2.7.1.165]
D4A92_04660  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
D4A92_01390  2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
D4A92_04615  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
D4A92_04625  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
D4A92_04630  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
D4A92_04635  formate dehydrogenase subunit gamma [KO:K00127]
D4A92_03490  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
D4A92_23780  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
D4A92_06825  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rros00010  Glycolysis / Gluconeogenesis
rros00020  Citrate cycle (TCA cycle)
rros00030  Pentose phosphate pathway
rros00053  Ascorbate and aldarate metabolism
rros00071  Fatty acid degradation
rros00230  Purine metabolism
rros00250  Alanine, aspartate and glutamate metabolism
rros00260  Glycine, serine and threonine metabolism
rros00620  Pyruvate metabolism
rros00710  Carbon fixation by Calvin cycle
rros00750  Vitamin B6 metabolism
rros00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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