KEGG   PATHWAY: rros00230
Entry
rros00230                   Pathway                                
Name
Purine metabolism - Rhizobium rosettiformans
Class
Metabolism; Nucleotide metabolism
Pathway map
rros00230  Purine metabolism
rros00230

Module
rros_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rros00230]
rros_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rros00230]
rros_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rros00230]
rros_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rros00230]
rros_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rros00230]
rros_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rros00230]
Other DBs
GO: 0006163 0042278
Organism
Rhizobium rosettiformans [GN:rros]
Gene
D4A92_14635  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
D4A92_07465  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
D4A92_01180  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
D4A92_20270  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
D4A92_24145  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
D4A92_14350  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
D4A92_11790  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
D4A92_14645  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
D4A92_18275  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
D4A92_18245  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
D4A92_18255  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
D4A92_14650  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
D4A92_00890  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
D4A92_00885  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
D4A92_03360  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
D4A92_18240  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
D4A92_18205  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
D4A92_05890  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
D4A92_20390  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
D4A92_00990  LysM peptidoglycan-binding domain-containing protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
D4A92_16275  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
D4A92_07495  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
D4A92_20255  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D4A92_04325  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
D4A92_11210  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
D4A92_14580  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
D4A92_08505  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
D4A92_15995  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
D4A92_21005  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
D4A92_21010  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
D4A92_03990  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
D4A92_03995  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
D4A92_04000  aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
D4A92_04865  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
D4A92_08235  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
D4A92_21050  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
D4A92_14470  guanylate kinase [KO:K00942] [EC:2.7.4.8]
D4A92_15950  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
D4A92_16220  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
D4A92_14230  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
D4A92_14120  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
D4A92_11180  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
D4A92_14670  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
D4A92_12540  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
D4A92_19995  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
D4A92_00135  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
D4A92_07470  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
D4A92_13995  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
D4A92_20920  ade; adenine deaminase [KO:K01486] [EC:3.5.4.2]
D4A92_16080  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
D4A92_00730  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
D4A92_15800  adenylate kinase [KO:K00939] [EC:2.7.4.3]
D4A92_24130  adenylate kinase [KO:K00939] [EC:2.7.4.3]
D4A92_17270  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
D4A92_12735  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
D4A92_12740  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
D4A92_21070  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
D4A92_02420  aspartate/glutamate racemase family protein [KO:K16841] [EC:5.1.99.3]
D4A92_21125  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
D4A92_21100  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
D4A92_21075  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
D4A92_21420  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
D4A92_21435  urease subunit beta [KO:K01429] [EC:3.5.1.5]
D4A92_21440  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
D4A92_24125  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rros00030  Pentose phosphate pathway
rros00220  Arginine biosynthesis
rros00250  Alanine, aspartate and glutamate metabolism
rros00260  Glycine, serine and threonine metabolism
rros00340  Histidine metabolism
rros00630  Glyoxylate and dicarboxylate metabolism
rros00730  Thiamine metabolism
rros00740  Riboflavin metabolism
rros00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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