KEGG   PATHWAY: rrt00240
Entry
rrt00240                    Pathway                                
Name
Pyrimidine metabolism - Rhodococcus rhodochrous
Class
Metabolism; Nucleotide metabolism
Pathway map
rrt00240  Pyrimidine metabolism
rrt00240

Module
rrt_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rrt00240]
rrt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rrt00240]
rrt_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rrt00240]
Other DBs
GO: 0006220 0006213
Organism
Rhodococcus rhodochrous [GN:rrt]
Gene
4535765_02184  carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
4535765_02183  carA; carbamoyl-phosphate synthase small subunit cara [KO:K01956] [EC:6.3.5.5]
4535765_02180  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
4535765_02181  pyrC; allantoinase [KO:K01465] [EC:3.5.2.3]
4535765_02325  pyrD; dihydroorotate dehydrogenase pyrd [KO:K00254] [EC:1.3.5.2]
4535765_03992  pyrE; orotate phosphoribosyltransferase pyre [KO:K00762] [EC:2.4.2.10]
4535765_02185  pyrF; orotidine-5'-phosphate decarboxylase pyrf [KO:K01591] [EC:4.1.1.23]
4535765_01930  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
4535765_01863  ndkA; nucleoside-diphosphate kinase ndka [KO:K00940] [EC:2.7.4.6]
4535765_01130  mazG; ntp pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
4535765_03376  maf; maf-like protein [KO:K06287] [EC:3.6.1.-]
4535765_02754  pyrG; ctp synthase pyrg [KO:K01937] [EC:6.3.4.2]
4535765_02747  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
4535765_00278  yhcR; nucleotidase [KO:K01081] [EC:3.1.3.5]
4535765_02511  Uncharacterized protein conserved in bacteria [KO:K01081] [EC:3.1.3.5]
4535765_03749  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
4535765_02557  nagD_1; NMP phosphatase [KO:K02566] [EC:3.1.3.5]
4535765_02489  Uncharacterized protein conserved in bacteria [KO:K09913] [EC:2.4.2.1 2.4.2.2]
4535765_03411  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
4535765_02179  pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase [KO:K02825] [EC:2.4.2.9]
4535765_01606  psuG; Pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
4535765_03419  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
4535765_03818  bsr; Blasticidin-S deaminase [KO:K01489] [EC:3.5.4.5]
4535765_04165  dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
4535765_03218  nrdE2; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
4535765_03887  nrdE; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
4535765_00037  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
4535765_03217  nrdF; ribonucleoside-diphosphate reductase nrdf [KO:K00526] [EC:1.17.4.1]
4535765_03339  tmk; putative thymidylate kinase [KO:K00943] [EC:2.7.4.9]
4535765_02074  dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
4535765_03418  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
4535765_01025  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
4535765_01998  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
4535765_01837  amaB; allantoate amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
4535765_00373  rutA_2; FMNH2-dependent dimethyl sulfone monooxygenase [KO:K09018] [EC:1.14.99.46]
4535765_03099  rutB; isochorismatase [KO:K09020] [EC:3.5.1.110]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
rrt00030  Pentose phosphate pathway
rrt00220  Arginine biosynthesis
rrt00250  Alanine, aspartate and glutamate metabolism
rrt00280  Valine, leucine and isoleucine degradation
rrt00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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