KEGG   PATHWAY: rrt00630
Entry
rrt00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhodococcus rhodochrous
Class
Metabolism; Carbohydrate metabolism
Pathway map
rrt00630  Glyoxylate and dicarboxylate metabolism
rrt00630

Module
rrt_M00621  Glycine cleavage system [PATH:rrt00630]
rrt_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rrt00630]
Other DBs
GO: 0046487 0043648
Organism
Rhodococcus rhodochrous [GN:rrt]
Gene
4535765_03766  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
4535765_00471  acs_1; propionate-CoA ligase/acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
4535765_01944  acs_2; fatty-acid--CoA ligase [KO:K01895] [EC:6.2.1.1]
4535765_02726  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
4535765_00932  citA; putative citrate synthase [KO:K01647] [EC:2.3.3.1]
4535765_00939  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
4535765_03917  prpC; 2-methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
4535765_01499  acnA3_1; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
4535765_02245  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
4535765_03430  acnA3_2; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
4535765_00655  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_00606  pcaF; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_00618  thlA_1; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_00646  fadA_3; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_00408  fadA_2; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_01102  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_01715  acyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_01826  fadA_4; thiolase [KO:K00626] [EC:2.3.1.9]
4535765_01620  thlA_2; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_04197  fadI; thiolase [KO:K00626] [EC:2.3.1.9]
4535765_04608  bktB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_04725  catF; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_04315  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
4535765_02282  thiolase [KO:K00626] [EC:2.3.1.9]
4535765_01714  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
4535765_03381  accA1_2; acyl-CoA carboxylase alpha chain [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
4535765_03374  accD5_4; propionyl-CoA carboxylase beta chain [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
4535765_03375  Uncharacterised protein [KO:K27095]
4535765_03065  accD5_3; propionyl-CoA carboxylase beta chain [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
4535765_02307  mutA; methylmalonyl-CoA mutase muta [KO:K01847] [EC:5.4.99.2]
4535765_02308  mutB_1; methylmalonyl-CoA mutase b12 binding subunit mutb [KO:K01847] [EC:5.4.99.2]
4535765_04391  scpA_2; methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
4535765_04392  mutB_2; methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
4535765_03395  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
4535765_00067  katA; catalase [KO:K03781] [EC:1.11.1.6]
4535765_00078  katE; catalase [KO:K03781] [EC:1.11.1.6]
4535765_00447  cat; catalase [KO:K03781] [EC:1.11.1.6]
4535765_03052  putative hydrolase [KO:K01091] [EC:3.1.3.18]
4535765_01841  glnT; glutamine synthetase/guanido kinase [KO:K01915] [EC:6.3.1.2]
4535765_03031  glnA1; glutamate-ammonia ligase glna1 [KO:K01915] [EC:6.3.1.2]
4535765_03036  glnA2_1; glutamate-ammonia ligase glna2 [KO:K01915] [EC:6.3.1.2]
4535765_03822  glnA2_2; glutamate-ammonia ligase glna2 [KO:K01915] [EC:6.3.1.2]
4535765_01172  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
4535765_02729  gcvP; glycine dehydrogenase (decarboxylating) gcvp [KO:K00281] [EC:1.4.4.2]
4535765_03024  gcvT_2; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
4535765_03787  lpd; dihydrolipoamide dehydrogenase/branched-chain alpha-ketoacid dehydrogenase [KO:K00382] [EC:1.8.1.4]
4535765_02734  gcvH; glycine cleavage system protein h [KO:K02437]
4535765_01420  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
4535765_01383  sucA; 2-oxoglutarate dehydrogenase suca [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
4535765_01776  fdnG; formate dehydrogenase alpha subunit fdng [KO:K00123] [EC:1.17.1.9]
4535765_01777  fdhA_1; molybdopterin oxidoreductase fe4S4 region [KO:K00123] [EC:1.17.1.9]
4535765_01775  fdoH; 4Fe-4S ferredoxin [KO:K00124]
4535765_03821  kynB_1; putative polyketide cyclase [KO:K07130] [EC:3.5.1.9]
4535765_03725  purU; formyltetrahydrofolate deformylase puru [KO:K01433] [EC:3.5.1.10]
4535765_01213  amdA; formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rrt00010  Glycolysis / Gluconeogenesis
rrt00020  Citrate cycle (TCA cycle)
rrt00030  Pentose phosphate pathway
rrt00053  Ascorbate and aldarate metabolism
rrt00071  Fatty acid degradation
rrt00230  Purine metabolism
rrt00250  Alanine, aspartate and glutamate metabolism
rrt00260  Glycine, serine and threonine metabolism
rrt00620  Pyruvate metabolism
rrt00710  Carbon fixation by Calvin cycle
rrt00750  Vitamin B6 metabolism
rrt00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system