KEGG   PATHWAY: sanh00515
Entry
sanh00515                   Pathway                                
Name
Mannose type O-glycan biosynthesis - Sinocyclocheilus anshuiensis
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
sanh00515  Mannose type O-glycan biosynthesis
sanh00515

Module
sanh_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:sanh00515]
Other DBs
GO: 0035269
Organism
Sinocyclocheilus anshuiensis [GN:sanh]
Gene
107697758  protein O-mannosyl-transferase 2-like isoform X1 [KO:K00728] [EC:2.4.1.109]
107703250  protein O-mannosyl-transferase 1-like [KO:K00728] [EC:2.4.1.109]
107699719  protein O-mannosyl-transferase 1-like [KO:K00728] [EC:2.4.1.109]
107674120  protein O-mannosyl-transferase 2-like isoform X1 [KO:K00728] [EC:2.4.1.109]
107692396  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [KO:K09666] [EC:2.4.1.-]
107675946  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [KO:K09666] [EC:2.4.1.-]
107665944  beta-1,4-galactosyltransferase 1-like [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107697619  beta-1,4-galactosyltransferase 1-like [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107692709  beta-1,4-galactosyltransferase 1-like [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107677371  beta-1,4-galactosyltransferase 1-like isoform X1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107700994  beta-1,4-galactosyltransferase 2-like [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107657457  beta-1,4-galactosyltransferase 2-like [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107672040  beta-1,4-galactosyltransferase 3-like isoform X1 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
107699583  beta-1,4-galactosyltransferase 3-like isoform X1 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
107668306  beta-1,4-galactosyltransferase 3-like isoform X1 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
107666799  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
107686779  st3gal3; CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase [KO:K00781] [EC:2.4.3.6]
107672677  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1 [KO:K00781] [EC:2.4.3.6]
107700542  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like [KO:K00781] [EC:2.4.3.6]
107684930  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1 [KO:K00781] [EC:2.4.3.6]
107679514  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like [KO:K00735] [EC:2.4.1.135]
107662141  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1 [KO:K00735] [EC:2.4.1.135]
107676758  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X1 [KO:K00735] [EC:2.4.1.135]
107653716  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like [KO:K00735] [EC:2.4.1.135]
107673925  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2-like [KO:K10157] [EC:2.4.1.135]
107694338  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2-like [KO:K10157] [EC:2.4.1.135]
107655943  chst10; carbohydrate sulfotransferase 10 isoform X1 [KO:K09674] [EC:2.8.2.-]
107699665  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107680752  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107683254  fut9; alpha-(1,3)-fucosyltransferase 9 [KO:K03663] [EC:2.4.1.152]
107699637  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107693061  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107670988  alpha-(1,3)-fucosyltransferase 9-like isoform X1 [KO:K03663] [EC:2.4.1.152]
107670991  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107682543  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107682550  alpha-(1,3)-fucosyltransferase 9-like [KO:K03663] [EC:2.4.1.152]
107684593  mgat5b; alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [KO:K09661] [EC:2.4.1.-]
107657577  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [KO:K18207] [EC:2.4.1.312]
107704096  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like isoform X1 [KO:K18207] [EC:2.4.1.312]
107667096  UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2-like [KO:K09654] [EC:2.4.1.313]
107691207  b3galnt2; UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 [KO:K09654] [EC:2.4.1.313]
107678554  protein O-mannose kinase [KO:K17547] [EC:2.7.1.183]
107683245  isoprenoid synthase domain-containing protein-like isoform X1 [KO:K21031] [EC:2.7.7.40]
107704765  isoprenoid synthase domain-containing protein-like [KO:K21031] [EC:2.7.7.40]
107693406  fukutin-like isoform X1 [KO:K19872] [EC:2.7.8.-]
107699175  fukutin-related protein-like [KO:K19873] [EC:2.7.8.-]
107699218  fukutin-related protein-like [KO:K19873] [EC:2.7.8.-]
107670366  tmem5; transmembrane protein 5 [KO:K21052] [EC:2.4.2.61]
107684684  transmembrane protein 5-like [KO:K21052] [EC:2.4.2.61]
107696735  beta-1,4-glucuronyltransferase 1 [KO:K21032] [EC:2.4.1.-]
107692823  beta-1,4-glucuronyltransferase 1-like [KO:K21032] [EC:2.4.1.-]
107687564  glycosyltransferase-like protein LARGE1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
107670633  glycosyltransferase-like protein LARGE2 isoform X1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
107670096  glycosyltransferase-like protein LARGE2 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
107699203  glycosyltransferase-like protein LARGE1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026   
G13027   
G13028   
G13082   
G13083   
G13084  O-Mannose core M1
G13085   
G13086  O-Mannose core M2
G13087   
G13088   
G13089   
G13090   
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093   
G13094   
G13095   
G13096   
G13097   
G13098   
G13099   
G13100   
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
sanh00510  N-Glycan biosynthesis
KO pathway
ko00515   
LinkDB

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