KEGG   PATHWAY: saz00010
Entry
saz00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shewanella amazonensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
saz00010  Glycolysis / Gluconeogenesis
saz00010

Module
saz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:saz00010]
saz_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:saz00010]
saz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:saz00010]
Other DBs
GO: 0006096 0006094
Organism
Shewanella amazonensis [GN:saz]
Gene
Sama_0912  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Sama_0599  D-fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Sama_2756  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Sama_0957  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Sama_1806  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
Sama_1808  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Sama_2757  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Sama_0060  phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Sama_1036  enolase [KO:K01689] [EC:4.2.1.11]
Sama_1814  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Sama_2072  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Sama_0375  pyruvate dehydrogenase, E1 component [KO:K00163] [EC:1.2.4.1]
Sama_0376  Dihydrolipoyllysine-residue succinyltransferase [KO:K00627] [EC:2.3.1.12]
Sama_0377  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Sama_0004  alcohol dehydrogenase, zinc-binding [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Sama_1693  aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Sama_2455  alcohol dehydrogenase II [KO:K13954] [EC:1.1.1.1]
Sama_2709  D-isomer specific 2-hydroxyacid dehydrogenase family protein [KO:K13979] [EC:1.1.1.2]
Sama_3435  Aldehyde dehydrogenase (NAD(+)) [KO:K00138] [EC:1.2.1.-]
Sama_2079  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Sama_0535  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Sama_1706  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Sama_2115  conserved hypothetical protein [KO:K01792] [EC:5.1.3.15]
Sama_0165  Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Sama_1649  Protein-N(pi)-phosphohistidine--sugar phosphotransferase [KO:K02777] [EC:2.7.1.-]
Sama_1133  PTS system, glucose-specific IIBC component [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
saz00020  Citrate cycle (TCA cycle)
saz00030  Pentose phosphate pathway
saz00500  Starch and sucrose metabolism
saz00620  Pyruvate metabolism
saz00640  Propanoate metabolism
saz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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