KEGG   PATHWAY: sbh00630
Entry
sbh00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces bingchenggensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
sbh00630  Glyoxylate and dicarboxylate metabolism
sbh00630

Module
sbh_M00621  Glycine cleavage system [PATH:sbh00630]
sbh_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sbh00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces bingchenggensis [GN:sbh]
Gene
SBI_00994  putative acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SBI_02959  putative acetyl-coprotein A synthetase [KO:K01895] [EC:6.2.1.1]
SBI_05828  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SBI_02941  malate synthase [KO:K01638] [EC:2.3.3.9]
SBI_04749  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
SBI_04868  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
SBI_07003  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
SBI_03189  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
SBI_01085  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_01735  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_02643  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_03753  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_04550  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_07561  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_09838  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SBI_01373  dehydrogenase [KO:K14446] [EC:1.3.1.85]
SBI_03754  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
SBI_02837  putative methylmalonyl-CoA mutase alpha subunit [KO:K14447] [EC:5.4.99.63]
SBI_04611  acyl-CoA carboxylase complex A subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
SBI_06761  putative acyl-CoA carboxylase alpha subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
SBI_04601  putative acyl-CoA carboxylase beta subunit [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
SBI_04602  hypothetical protein [KO:K27095]
SBI_01774  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
SBI_01775  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
SBI_04700  methylmalonyll-CoA mutase [KO:K01848] [EC:5.4.99.2]
SBI_00835  methylaspartate mutase E subunit [KO:K19268] [EC:5.4.99.1]
SBI_00836  hypothetical protein [KO:K01846] [EC:5.4.99.1]
SBI_06655  putative oxidoreductase [KO:K00104] [EC:1.1.99.14]
SBI_02780  catalase HPII [KO:K03781] [EC:1.11.1.6]
SBI_05194  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein [KO:K00015] [EC:1.1.1.26]
SBI_00348  putative phosphatase [KO:K01091] [EC:3.1.3.18]
SBI_04919  hydrolase [KO:K01091] [EC:3.1.3.18]
SBI_05081  hydrolase [KO:K01091] [EC:3.1.3.18]
SBI_05456  haloacid dehalogenase-like hydrolase [KO:K01091] [EC:3.1.3.18]
SBI_01419  glnA1; L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SBI_02556  glnA3; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SBI_02102  glnA2; glutamine synthetase catalytic region [KO:K01915] [EC:6.3.1.2]
SBI_07706  glnA4; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SBI_07773  glnA5; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SBI_01554  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SBI_03616  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SBI_03786  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SBI_04724  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SBI_08743  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
SBI_03614  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
SBI_07790  lpdA2; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SBI_09038  lpdA3; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SBI_03053  lpdA1; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SBI_03615  gcvH; glycine cleavage system protein H [KO:K02437]
SBI_00742  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
SBI_09208  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
SBI_00740  Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
SBI_00741  putative dehydrogenase [KO:K00042] [EC:1.1.1.60]
SBI_01819  glycerate kinase [KO:K00865] [EC:2.7.1.165]
SBI_02842  glycerate kinase [KO:K00865] [EC:2.7.1.165]
SBI_00605  putative isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase ttuC [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
SBI_00637  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
SBI_09186  3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
SBI_00451  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SBI_01320  2-keto-3-deoxy-6-phospho-gluconate aldolase-like protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SBI_02925  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SBI_07625  kdgA; putative KDPG and KHG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SBI_03883  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
SBI_08434  bicupin, oxalate decarboxylase family protein [KO:K01569] [EC:4.1.1.2]
SBI_08393  hypothetical protein [KO:K00127]
SBI_00211  hypothetical protein [KO:K01432] [EC:3.5.1.9]
SBI_01423  cyclase family protein [KO:K07130] [EC:3.5.1.9]
SBI_04837  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
SBI_02715  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sbh00010  Glycolysis / Gluconeogenesis
sbh00020  Citrate cycle (TCA cycle)
sbh00030  Pentose phosphate pathway
sbh00053  Ascorbate and aldarate metabolism
sbh00071  Fatty acid degradation
sbh00230  Purine metabolism
sbh00250  Alanine, aspartate and glutamate metabolism
sbh00260  Glycine, serine and threonine metabolism
sbh00620  Pyruvate metabolism
sbh00710  Carbon fixation by Calvin cycle
sbh00750  Vitamin B6 metabolism
sbh00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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