KEGG   PATHWAY: scap00010
Entry
scap00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus capitis subsp. capitis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scap00010  Glycolysis / Gluconeogenesis
scap00010

Module
scap_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:scap00010]
scap_M00002  Glycolysis, core module involving three-carbon compounds [PATH:scap00010]
scap_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scap00010]
scap_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scap00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus capitis subsp. capitis [GN:scap]
Gene
AYP1020_0845  glcK; Glucokinase [KO:K25026] [EC:2.7.1.2]
AYP1020_0232  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AYP1020_0979  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
AYP1020_1670  fbp; Fructose-1,6-bisphosphatase class 3 [KO:K04041] [EC:3.1.3.11]
AYP1020_1778  fda; Fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
AYP1020_1312  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
AYP1020_0143  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
AYP1020_0141  gapA1; Glyceraldehyde-3-phosphate dehydrogenase 1 [KO:K00134] [EC:1.2.1.12]
AYP1020_0969  gapA2; Glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K00150] [EC:1.2.1.59]
AYP1020_0142  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AYP1020_2143  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
AYP1020_1605  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
AYP1020_0144  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
AYP1020_0145  eno; Enolase [KO:K01689] [EC:4.2.1.11]
AYP1020_0978  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
AYP1020_1784  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
AYP1020_0417  pdhA; Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
AYP1020_0418  pdhB; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
AYP1020_0419  pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
AYP1020_0420  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AYP1020_0817  lpd3; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
AYP1020_0598  korA; 2-oxoglutarate oxidoreductase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
AYP1020_0599  korB; 2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
AYP1020_1769  ldh2; L-lactate dehydrogenase 2 [KO:K00016] [EC:1.1.1.27]
AYP1020_1677  aldA_2; Putative aldehyde dehydrogenase AldA [KO:K00128] [EC:1.2.1.3]
AYP1020_1309  Putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AYP1020_1013  acsA_1; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AYP1020_1785  acsA_2; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AYP1020_1517  mro; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
AYP1020_0378  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AYP1020_1063  pckA; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
AYP1020_0739  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
AYP1020_1707  glcB; PTS system glucoside-specific EIICBA component [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
scap00020  Citrate cycle (TCA cycle)
scap00030  Pentose phosphate pathway
scap00500  Starch and sucrose metabolism
scap00620  Pyruvate metabolism
scap00640  Propanoate metabolism
scap00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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